myRT

myRT report for GCA_001906285.1_ASM190628v1

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Seq: LPTD01000169.1 Shigella boydii strain 602988 602988_170, whole genome shotgun sequence (7417 bp)
Overview 1 RT 1: 4402-7056 bp Neighborhood of RT #1 [4402, 7056] COG3547 RVT-GII GIIM Feature: gene Location: 4402-4887 bp Feature: domain Description: COG3547 Location: 4420-4873 bp Feature: domain Description: COG3547 Location: 4420-4873 bp Feature: gene Location: 4983-5150 bp Feature: gene Location: 5176-6393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5362-6016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5362-601 6 bp Feature: domain Description: GIIM Note: maturase Location: 6094-6316 bp Feature: domain Description: GIIM Note: maturase Location: 6094-631 6 bp Feature: gene Location: 6404-6823 bp Feature: gene Location: 6862-7056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: LPTD01000511.1 Shigella boydii strain 602988 602988_512, whole genome shotgun sequence (1226 bp)
Overview 1 RT 1: 3-1224 bp Neighborhood of RT #1 [3, 1223] Tra5 RVT-GII InsE Feature: gene Location: 3-167 bp Feature: domain Description: Tra5 Location: 6-150 bp Feature: domain Description: Tra5 Location: 6-150 bp Feature: gene Location: 180-875 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 480-873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 480-873 bp Feature: gene Location: 927-1223 bp Feature: domain Description: InsE Location: 930-1224 bp Feature: domain Description: InsE Location: 930-12 2 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Tra5 (COG2801), InsE (COG2963)