myRT

myRT report for GCA_001907195.1_ASM190719v1

Download annotations/find similar RTs

Seq: LVWA01000005.1 Pontibacter sp. S10-8 contig_13, whole genome shotgun sequence (1011323 bp)
Overview 1 RT 1: 230583-236863 bp 2 RT 2: 268469-274160 bp Neighborhood of RT #1 [230583, 236862] REC RVT-Retrons WYL Neighborhood of RT #2 [268469, 274183] AAA_15 TOPRIM_OLD RVT-Retrons RlaP RlaP RlaP Feature: gene Location: 230583-232550 bp Ori: OKL39973.1 Feature: domain Description: REC Location: 231294-231615 bp Feature: domain Description: REC Location: 231 294-231 61 5 bp Feature: gene Location: 232566-233249 bp Feature: gene Location: 233236-235464 bp Ori: OKL39975.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 233434-234076 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 233434-234076 bp Feature: gene Location: 235488-235730 bp Feature: gene Location: 235894-236862 bp Feature: domain Description: WYL Location: 236362-236863 bp Feature: domain Description: WYL Location: 236362-236863 bp Feature: gene Location: 268469-270328 bp Ori: OKL40002.1 Feature: domain Description: AAA_15 Location: 268472-269543 bp Feature: domain Description: AAA_1 5 Location: 268472-269543 bp Feature: domain Description: TOPRIM_OLD Location: 269693-269948 bp Feature: domain Description: TOPRIM_OLD Location: 269693-269948 bp Feature: gene Location: 270368-271255 bp Feature: gene Location: 271407-272294 bp Ori: OKL40004.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 271515-272058 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 271 51 5-272058 bp Feature: gene Location: 272367-273431 bp Ori: OKL40005.1 Feature: domain Description: RlaP Location: 272397-272751 bp Feature: domain Description: RlaP Location: 272397-272751 bp Feature: domain Description: RlaP Location: 273123-273399 bp Feature: domain Description: RlaP Location: 2731 23-273399 bp Feature: gene Location: 273422-274183 bp Ori: OKL40006.1 Feature: domain Description: RlaP Location: 273425-274160 bp Feature: domain Description: RlaP Location: 273425-2741 60 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT REC (smart00448), RVT-Retrons, WYL (pfam13280), AAA_15 (pfam13175), TOPRIM_OLD (cd01026), RlaP

Seq: LVWA01000004.1 Pontibacter sp. S10-8 contig_12, whole genome shotgun sequence (795735 bp)
Overview 1 RT 1: 365216-372649 bp Neighborhood of RT #1 [365216, 372651] OmpA RVT-UG19 PLN02437 PTZ00211 Feature: gene Location: 365216-365851 bp Ori: OKL40895.1 Feature: domain Description: OmpA Location: 365423-365831 bp Feature: domain Description: OmpA Location: 36542 3-365831 bp Feature: gene Location: 366035-366442 bp Feature: gene Location: 366817-368901 bp Ori: OKL40897.1 Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 367186-367666 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 367186-367666 bp Feature: gene Location: 369019-371403 bp Ori: OKL40898.1 Feature: domain Description: PLN02437 Location: 369022-371401 bp Feature: domain Description: PLN02 437 Location: 36902 2 -371401 bp Feature: gene Location: 371764-372651 bp Ori: OKL41259.1 Feature: domain Description: PTZ00211 Location: 371767-372649 bp Feature: domain Description: PTZ002 11 Location: 371767-372 649 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpA (pfam00691), RVT-UG19, PLN02437 (ribonucleoside--diphosphate reductase large subunit), PTZ00211 (ribonucleoside-diphosphate reductase small subunit; Provisional)