myRT

myRT report for GCA_001907615.1_ASM190761v1

Download annotations/find similar RTs

Seq: JMHR01000251.1 Mycobacterium sp. SWH-M3 SWH-M3(paired)_contig_251, whole genome shotgun sequence (19149 bp)
Overview 1 RT 1: 12733-16510 bp Neighborhood of RT #1 [12733, 16629] Resolvase Recombinase Zn_ribbon_recom RHH_1 RVT-GII GIIM Feature: gene Location: 12733-15351 bp Feature: domain Description: Resolvase Location: 12745-13186 bp Feature: domain Description: Resolvase Location: 1 2745-1 31 86 bp Feature: domain Description: Recombinase Location: 13273-13636 bp Feature: domain Description: Recombinase Location: 1 3273-1 3636 bp Feature: domain Description: Zn_ribbon_recom Location: 13675-13864 bp Feature: domain Description: Zn_ribbon_recom Location: 1 3675-1 3864 bp Feature: gene Location: 15484-15798 bp Feature: domain Description: RHH_1 Location: 15661-15772 bp Feature: domain Description: RHH_1 Location: 1 5661 -1 5772 bp Feature: gene Location: 15859-16629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15943-16231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5943-1 6231 bp Feature: domain Description: GIIM Note: maturase Location: 16321-16510 bp Feature: domain Description: GIIM Note: maturase Location: 1 6321 -1 651 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), RHH_1 (pfam01402), RVT-GII, GIIM (pfam08388)

Seq: JMHR01000040.1 Mycobacterium sp. SWH-M3 SWH-M3(paired)_contig_40, whole genome shotgun sequence (1973 bp)
Overview 1 RT 1: 828-1764 bp Neighborhood of RT #1 [828, 1859] RVT-GII GIIM Feature: gene Location: 828-1859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 837-1461 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1764 bp Feature: domain Description: GIIM Note: maturase Location: 1554-1764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JMHR01000218.1 Mycobacterium sp. SWH-M3 SWH-M3(paired)_contig_218, whole genome shotgun sequence (3914 bp)
Overview 1 RT 1: 1-3683 bp Neighborhood of RT #1 [1, 3683] RVT-GII GIIM Feature: gene Location: 1-1054 bp Feature: gene Location: 1595-3031 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1919-2600 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1919-2600 bp Feature: domain Description: GIIM Note: maturase Location: 2672-2888 bp Feature: domain Description: GIIM Note: maturase Location: 2672-2888 bp Feature: gene Location: 3184-3411 bp Feature: gene Location: 3408-3683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)