myRT

myRT report for GCA_001907975.2_ASM190797v2

Download annotations/find similar RTs

Seq: CP017834.1 Silvanigrella aquatica strain MWH-Nonnen-W8red chromosome (3342382 bp)
Overview 1 RT 1: 1964576-1969185 bp 2 RT 2: 2226517-2229283 bp Neighborhood of RT #1 [1964576, 1969202] RVT-GII InsQ OrfB_IS605 Neighborhood of RT #2 [2226517, 2229288] DUF4258 YiaG RVT-GII DDE_3 RICIN Feature: gene Location: 1964576-1964986 bp Feature: gene Location: 1965284-1966309 bp Feature: gene Location: 1966769-1968130 bp Ori: APJ05133.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1967054-1967741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 967054-1 967741 bp Feature: gene Location: 1968682-1968999 bp Ori: APJ03877.1 Feature: domain Description: InsQ Location: 1968691-1968967 bp Feature: domain Description: InsQ Location: 1 968691 -1 968967 bp Feature: gene Location: 1969020-1969202 bp Ori: APJ03878.1 Feature: domain Description: OrfB_IS605 Location: 1969026-1969185 bp Feature: domain Description: OrfB_IS605 Location: 1 969026-1 9691 85 bp Feature: gene Location: 2226517-2226837 bp Ori: APJ04107.1 Feature: domain Description: DUF4258 Location: 2226601-2226805 bp Feature: domain Description: DUF4258 Location: 2226601 -2226805 bp Feature: gene Location: 2226834-2227259 bp Ori: APJ04108.1 Feature: domain Description: YiaG Location: 2226975-2227116 bp Feature: domain Description: YiaG Location: 2226975-22271 1 6 bp Feature: gene Location: 2227851-2228312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2228052-2228313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2228052-222831 3 bp Feature: gene Location: 2228355-2228711 bp Ori: APJ04109.1 Feature: domain Description: DDE_3 Location: 2228367-2228613 bp Feature: domain Description: DDE_3 Location: 2228367-222861 3 bp Feature: gene Location: 2228851-2229288 bp Ori: APJ04110.1 Feature: domain Description: RICIN Location: 2228938-2229283 bp Feature: domain Description: RICIN Location: 2228938-2229283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, InsQ (COG0675), OrfB_IS605 (pfam01385), DUF4258 (pfam14076), YiaG (COG2944), DDE_3 (pfam13358), RICIN (smart00458)