myRT

myRT report for GCA_001908045.1_ASM190804v1

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Seq: MQRH01000028.1 Serratia fonticola strain 5l contig00028, whole genome shotgun sequence (64819 bp)
Overview 1 RT 1: 55345-60232 bp Neighborhood of RT #1 [55345, 60345] PucG PRK09290 RVT-GII STAS_anti-anti-sigma_factors GCD1 Feature: gene Location: 55345-56586 bp Ori: OKP24160.1 Feature: domain Description: PucG Location: 55384-56572 bp Feature: domain Description: PucG Location: 55384-56572 bp Feature: gene Location: 56586-57872 bp Ori: OKP24161.1 Feature: domain Description: PRK09290 Location: 56622-57819 bp Feature: domain Description: PRK09290 Location: 56622-5781 9 bp Feature: gene Location: 57999-58250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58002-58161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58002-581 61 bp Feature: gene Location: 58815-59147 bp Ori: OKP24162.1 Feature: domain Description: STAS_anti-anti-sigma_factors Location: 58827-59112 bp Feature: domain Description: STAS_anti-anti-sigma_factors Location: 58827-591 1 2 bp Feature: gene Location: 59182-60345 bp Ori: OKP24163.1 Feature: domain Description: GCD1 Location: 59185-60232 bp Feature: domain Description: GCD1 Location: 591 85-60232 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PucG (COG0075), PRK09290 (allantoate amidohydrolase; Reviewed), RVT-GII, STAS_anti-anti-sigma_factors (cd07043), GCD1 (COG1208)

Seq: MQRH01000010.1 Serratia fonticola strain 5l contig00010, whole genome shotgun sequence (185223 bp)
Overview 1 RT 1: 64104-67909 bp Neighborhood of RT #1 [64104, 67953] PRK15287 FimA RVT-UG4 HTH_LUXR Feature: gene Location: 64104-64604 bp Ori: OKP28088.1 Feature: domain Description: PRK15287 Location: 64146-64602 bp Feature: domain Description: PRK152 87 Location: 64146-64602 bp Feature: gene Location: 64615-65178 bp Ori: OKP28089.1 Feature: domain Description: FimA Location: 64663-65176 bp Feature: domain Description: FimA Location: 64663-65176 bp Feature: gene Location: 65332-65781 bp Ori: OKP28090.1 Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 65338-65704 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 65338-65704 bp Feature: gene Location: 66128-66868 bp Feature: gene Location: 67351-67953 bp Ori: OKP28092.1 Feature: domain Description: HTH_LUXR Location: 67747-67909 bp Feature: domain Description: HTH_LUXR Location: 67747-67909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15287 (fimbrial minor subunit StfF), FimA (pfam16970), RVT-UG4, HTH_LUXR (smart00421)