myRT

myRT report for GCA_001908205.1_ASM190820v1

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Seq: LGHL01000467.1 Bradyrhizobium sp. NAS80.1 Bradyrhizobium_NAS_80.1_rep_c4288, whole genome shotgun sequence (2531 bp)
Overview 1 RT 1: 446-2497 bp Neighborhood of RT #1 [446, 2531] RVT-GII GIIM COG3547 Feature: gene Location: 446-1768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 740-1 397 bp Feature: domain Description: GIIM Note: maturase Location: 1472-1676 bp Feature: domain Description: GIIM Note: maturase Location: 1 472-1 676 bp Feature: gene Location: 1945-2531 bp Feature: domain Description: COG3547 Location: 1951-2497 bp Feature: domain Description: COG3547 Location: 1 951 -2497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: LGHL01000343.1 Bradyrhizobium sp. NAS80.1 Bradyrhizobium_NAS_80.1_c343, whole genome shotgun sequence (2598 bp)
Overview 1 RT 1: 1-2597 bp Neighborhood of RT #1 [1, 2598] RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 1-398 bp Feature: gene Location: 913-2166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1120-1774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 112 0-1774 bp Feature: domain Description: GIIM Note: maturase Location: 1861-2071 bp Feature: domain Description: GIIM Note: maturase Location: 1861-2 071 bp Feature: gene Location: 2249-2598 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2255-2597 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2 2 55-2 597 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388)

Seq: LGHL01000479.1 Bradyrhizobium sp. NAS80.1 Bradyrhizobium_NAS_80.1_rep_c4300, whole genome shotgun sequence (2212 bp)
Overview 1 RT 1: 583-1957 bp Neighborhood of RT #1 [583, 2157] RVT_N RVT-GII GIIM Feature: gene Location: 583-2157 bp Feature: RT Description: RVT_N Location: 610-814 bp Feature: RT Description: RVT_N Location: 610-814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907-1669 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 907-1669 bp Feature: domain Description: GIIM Note: maturase Location: 1741-1957 bp Feature: domain Description: GIIM Note: maturase Location: 1741-1957 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LGHL01000476.1 Bradyrhizobium sp. NAS80.1 Bradyrhizobium_NAS_80.1_rep_c4297, whole genome shotgun sequence (1899 bp)
Overview 1 RT 1: 113-1331 bp Neighborhood of RT #1 [113, 1480] RVT-GII GIIM Feature: gene Location: 113-1480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 446-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 6-1061 bp Feature: domain Description: GIIM Note: maturase Location: 1121-1331 bp Feature: domain Description: GIIM Note: maturase Location: 1121-1331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LGHL01000456.1 Bradyrhizobium sp. NAS80.1 Bradyrhizobium_NAS_80.1_rep_c4276, whole genome shotgun sequence (1878 bp)
Overview 1 RT 1: 414-1620 bp Neighborhood of RT #1 [414, 1790] RVT-GII GIIM Feature: gene Location: 414-1790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741-1359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 741-135 9 bp Feature: domain Description: GIIM Note: maturase Location: 1410-1620 bp Feature: domain Description: GIIM Note: maturase Location: 1410-1620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LGHL01000238.1 Bradyrhizobium sp. NAS80.1 Bradyrhizobium_NAS_80.1_c238, whole genome shotgun sequence (7085 bp)
Overview 1 RT 1: 1-3548 bp Neighborhood of RT #1 [1, 3643] CadC1 TolBN APH RVT-GII GIIM Feature: gene Location: 1-549 bp Feature: domain Description: CadC1 Location: 10-337 bp Feature: domain Description: CadC1 Location: 10-337 bp Feature: domain Description: TolBN Location: 364-550 bp Feature: domain Description: TolBN Location: 36 4-550 bp Feature: gene Location: 885-1697 bp Feature: domain Description: APH Location: 912-1494 bp Feature: domain Description: APH Location: 912-1494 bp Feature: gene Location: 2312-3643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2603-3266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26 03-326 6 bp Feature: domain Description: GIIM Note: maturase Location: 3335-3548 bp Feature: domain Description: GIIM Note: maturase Location: 3335-3548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CadC1 (COG3710), TolBN (COG5616), RVT-GII, GIIM (pfam08388)