myRT

myRT report for GCA_001908925.1_PSEUfluor_ML11A_v1.0

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Seq: MRXZ01000061.1 Pseudomonas fluorescens strain ML11A scaffold_60, whole genome shotgun sequence (2560 bp)
Overview 1 RT 1: 1-2559 bp Neighborhood of RT #1 [1, 2560] IS5 RVT-GII GIIM DDE_Tnp_1 Feature: gene Location: 1-414 bp Feature: domain Description: IS5 Location: 64-391 bp Feature: domain Description: IS5 Location: 64-391 bp Feature: gene Location: 423-518 bp Feature: gene Location: 907-2175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1120-1777 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 20-1 777 bp Feature: domain Description: GIIM Note: maturase Location: 1855-2077 bp Feature: domain Description: GIIM Note: maturase Location: 1 855-2077 bp Feature: gene Location: 2208-2560 bp Feature: domain Description: DDE_Tnp_1 Location: 2232-2559 bp Feature: domain Description: DDE_Tnp_1 Location: 2232-2559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388)

Seq: MRXZ01000034.1 Pseudomonas fluorescens strain ML11A scaffold_33, whole genome shotgun sequence (64492 bp)
Overview 1 RT 1: 39379-44233 bp Neighborhood of RT #1 [39379, 44253] LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT_N RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C ACR3 Feature: gene Location: 39379-40686 bp Feature: domain Description: LZ_Tnp_IS66 Location: 39511-39718 bp Feature: domain Description: LZ_Tnp_IS66 Location: 39511-39718 bp Feature: domain Description: zf-IS66 Location: 39757-39871 bp Feature: domain Description: zf-IS66 Location: 39757-39871 bp Feature: domain Description: DDE_Tnp_IS66 Location: 39913-40687 bp Feature: domain Description: DDE_Tnp_IS66 Location: 39913-40687 bp Feature: gene Location: 41020-41235 bp Feature: gene Location: 41265-42926 bp Feature: RT Description: RVT_N Location: 41310-41553 bp Feature: RT Description: RVT_N Location: 41310-41553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41598-42234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41598-42 2 34 bp Feature: domain Description: GIIM Note: maturase Location: 42291-42519 bp Feature: domain Description: GIIM Note: maturase Location: 42 2 91-42 519 bp Feature: gene Location: 43031-43252 bp Feature: domain Description: DDE_Tnp_IS66 Location: 43037-43103 bp Feature: domain Description: DDE_Tnp_IS66 Location: 43037-43103 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 43124-43235 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 4312 4-432 35 bp Feature: gene Location: 43291-44253 bp Feature: domain Description: ACR3 Location: 43306-44233 bp Feature: domain Description: ACR3 Location: 43306-442 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), ACR3 (COG0798)