myRT

myRT report for GCA_001909095.1_ASM190909v1

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Seq: LVYZ01000109.1 Paenibacillus sp. P46E scaffold_89, whole genome shotgun sequence (2043 bp)
Overview 1 RT 1: 276-1813 bp Neighborhood of RT #1 [276, 1896] RVT-GII GIIM Feature: gene Location: 276-479 bp Feature: gene Location: 730-1896 bp Ori: OKP93849.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952-1573 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952-1 573 bp Feature: domain Description: GIIM Note: maturase Location: 1612-1813 bp Feature: domain Description: GIIM Note: maturase Location: 1 61 2-1 81 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LVYZ01000038.1 Paenibacillus sp. P46E scaffold_24, whole genome shotgun sequence (111891 bp)
Overview 1 RT 1: 78253-86070 bp Neighborhood of RT #1 [78253, 86075] AcrR Tas RVT-GII AbfA AbfA Feature: gene Location: 78253-78912 bp Ori: OKP97963.1 Feature: domain Description: AcrR Location: 78328-78583 bp Feature: domain Description: AcrR Location: 7832 8-78583 bp Feature: gene Location: 79158-80153 bp Ori: OKP97964.1 Feature: domain Description: Tas Location: 79161-80094 bp Feature: domain Description: Tas Location: 79161-80094 bp Feature: gene Location: 80281-81045 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80284-80452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 802 84-80452 bp Feature: gene Location: 82367-82636 bp Feature: gene Location: 83697-86075 bp Ori: OKP97966.1 Feature: domain Description: AbfA Location: 84339-85284 bp Feature: domain Description: AbfA Location: 84339-852 84 bp Feature: domain Description: AbfA Location: 85728-86070 bp Feature: domain Description: AbfA Location: 8572 8-86070 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcrR (COG1309), Tas (COG0667), RVT-GII, AbfA (COG3534)