myRT

myRT report for GCA_001909485.1_ASM190948v1

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Seq: MPVG01000018.1 Pseudomonas aeruginosa strain CLB24232 contig_18, whole genome shotgun sequence (82682 bp)
Overview 1 RT 1: 73388-82122 bp Neighborhood of RT #1 [73388, 82122] PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH INT_Rci_Hp1_C Feature: gene Location: 73388-77125 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73496-74153 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73496-741 53 bp Feature: domain Description: PRK09776 Location: 74366-74837 bp Feature: domain Description: PRK09776 Location: 74366-74837 bp Feature: domain Description: PAS Location: 74882-75419 bp Feature: domain Description: PAS Location: 74882-7541 9 bp Feature: domain Description: PRK10060 Location: 75428-77075 bp Feature: domain Description: PRK1 0060 Location: 75428-77075 bp Feature: gene Location: 77832-78011 bp Feature: gene Location: 78206-79891 bp Feature: RT Description: RVT_N Location: 78263-78503 bp Feature: RT Description: RVT_N Location: 78263-78503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78551-79187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78551 -791 87 bp Feature: domain Description: GIIM Note: maturase Location: 79241-79472 bp Feature: domain Description: GIIM Note: maturase Location: 79241 -79472 bp Feature: domain Description: HNH Note: nucleases Location: 79724-79862 bp Feature: domain Description: HNH Note: nucleases Location: 79724-79862 bp Feature: gene Location: 80193-81287 bp Feature: domain Description: INT_Rci_Hp1_C Location: 80703-81204 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 80703-81 204 bp Feature: gene Location: 81364-82122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), INT_Rci_Hp1_C (cd00796)