myRT

myRT report for GCA_001910845.1_ASM191084v1

Download annotations/find similar RTs

Seq: LRLP01000274.1 Escherichia coli strain 203272 jtg7180000056199f, whole genome shotgun sequence (20393 bp)
Overview 1 RT 1: 17680-19870 bp Neighborhood of RT #1 [17680, 19870] YeeP RVT-GII InsE Feature: gene Location: 17680-18555 bp Ori: OKX11918.1 Feature: domain Description: YeeP Location: 17695-18553 bp Feature: domain Description: YeeP Location: 1 7695-1 8553 bp Feature: gene Location: 18781-19023 bp Feature: gene Location: 18983-19295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18989-19079 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8989-1 9079 bp Feature: gene Location: 19563-19814 bp Feature: domain Description: InsE Location: 19575-19815 bp Feature: domain Description: InsE Location: 1 9575-1 981 5 bp Feature: gene Location: 19802-19870 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-GII, InsE (COG2963)

Seq: LRLP01000261.1 Escherichia coli strain 203272 ctg7180000056418, whole genome shotgun sequence (13900 bp)
Overview 1 RT 1: 4276-8881 bp Neighborhood of RT #1 [4276, 8881] LacI PBP1_GntR RVT-GII GIIM RVT-GII Feature: gene Location: 4276-5307 bp Ori: OKX12646.1 Feature: domain Description: LacI Location: 4318-4453 bp Feature: domain Description: LacI Location: 4318-4453 bp Feature: domain Description: PBP1_GntR Location: 4492-5302 bp Feature: domain Description: PBP1_GntR Location: 4492 -5302 bp Feature: gene Location: 5438-5656 bp Feature: gene Location: 5834-6640 bp Ori: OKX12654.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5837-6200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5837-62 00 bp Feature: domain Description: GIIM Note: maturase Location: 6248-6470 bp Feature: domain Description: GIIM Note: maturase Location: 62 48-6470 bp Feature: gene Location: 6658-7092 bp Ori: OKX12648.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6850-7066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6850-7066 bp Feature: gene Location: 7989-8327 bp Feature: gene Location: 8537-8881 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388)

Seq: LRLP01000198.1 Escherichia coli strain 203272 ctg7180000056355, whole genome shotgun sequence (15696 bp)
Overview 1 RT 1: 13416-15359 bp Neighborhood of RT #1 [13416, 15604] RVT-GII GIIM Feature: gene Location: 13416-13667 bp Feature: gene Location: 13702-14127 bp Feature: gene Location: 14081-15604 bp Ori: OKX16528.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14354-15086 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 143 54-15086 bp Feature: domain Description: GIIM Note: maturase Location: 15161-15359 bp Feature: domain Description: GIIM Note: maturase Location: 15161-153 59 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)