myRT

myRT report for GCA_001910905.1_ASM191090v1

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Seq: LRLR01000124.1 Escherichia coli strain 204021 ctg7180000013186, whole genome shotgun sequence (10491 bp)
Overview 1 RT 1: 4334-9380 bp Neighborhood of RT #1 [4334, 9391] prfC PRK10597 RVT-Retrons TIR_2 Resolvase Caudo_TAP Feature: gene Location: 4334-5920 bp Ori: OKW93371.1 Feature: domain Description: prfC Location: 4352-5918 bp Feature: domain Description: prfC Location: 4352-591 8 bp Feature: gene Location: 6140-6400 bp Ori: OKW93372.1 Feature: domain Description: PRK10597 Location: 6143-6383 bp Feature: domain Description: PRK1 0597 Location: 61 43-6383 bp Feature: gene Location: 6758-8362 bp Ori: OKW93373.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7049-7640 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7049-7640 bp Feature: domain Description: TIR_2 Location: 7967-8300 bp Feature: domain Description: TIR_2 Location: 7967-8300 bp Feature: gene Location: 8648-8776 bp Feature: domain Description: Resolvase Location: 8672-8777 bp Feature: domain Description: Resolvase Location: 8672-8777 bp Feature: gene Location: 8807-9391 bp Ori: OKW93374.1 Feature: domain Description: Caudo_TAP Location: 9023-9380 bp Feature: domain Description: Caudo_TAP Location: 9023-9380 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT prfC (TIGR00503), PRK10597 (DNA damage-inducible protein I; Provisional), RVT-Retrons, TIR_2 (pfam13676), Resolvase (smart00857), Caudo_TAP (pfam02413)

Seq: LRLR01000069.1 Escherichia coli strain 204021 ctg7180000013131, whole genome shotgun sequence (5268 bp)
Overview 1 RT 1: 2564-5229 bp Neighborhood of RT #1 [2564, 5231] RVT-GII GIIM PHA02517 Feature: gene Location: 2564-2731 bp Feature: gene Location: 2766-3191 bp Feature: gene Location: 3145-4668 bp Ori: OKW97325.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3418-4150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3418-4150 bp Feature: domain Description: GIIM Note: maturase Location: 4225-4423 bp Feature: domain Description: GIIM Note: maturase Location: 42 2 5-442 3 bp Feature: gene Location: 4743-5231 bp Ori: OKW97326.1 Feature: domain Description: PHA02517 Location: 4752-5229 bp Feature: domain Description: PHA02 517 Location: 4752 -52 2 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)

Seq: LRLR01000141.1 Escherichia coli strain 204021 ctg7180000013203, whole genome shotgun sequence (93147 bp)
Overview 1 RT 1: 39106-42988 bp Neighborhood of RT #1 [39106, 42993] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 39106-39822 bp Ori: OKW90953.1 Feature: domain Description: rph Location: 39109-39817 bp Feature: domain Description: rph Location: 3 9109-3 9817 bp Feature: gene Location: 39888-40529 bp Ori: OKW90954.1 Feature: domain Description: pyrE Location: 39891-40524 bp Feature: domain Description: pyrE Location: 3 9891-40524 bp Feature: gene Location: 40827-41786 bp Ori: OKW90955.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40962-41511 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40962-41511 bp Feature: gene Location: 41832-42428 bp Ori: OKW90956.1 Feature: domain Description: slmA Location: 41838-42414 bp Feature: domain Description: slmA Location: 4183 8-42414 bp Feature: gene Location: 42535-42993 bp Ori: OKW90957.1 Feature: domain Description: dut Location: 42541-42988 bp Feature: domain Description: dut Location: 42541-42988 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)