myRT

myRT report for GCA_001910935.1_ASM191093v1

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Seq: LRLX01000164.1 Escherichia coli strain 703491 ctg7180000018234, whole genome shotgun sequence (14247 bp)
Overview 1 RT 1: 5291-8766 bp Neighborhood of RT #1 [5291, 8771] DUF4094 Peptidase_S74 RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 5291-5995 bp Ori: OKX58511.1 Feature: domain Description: DUF4094 Location: 5333-5423 bp Feature: domain Description: DUF4094 Location: 5333-5423 bp Feature: domain Description: Peptidase_S74 Location: 5639-5798 bp Feature: domain Description: Peptidase_S74 Location: 5639-5798 bp Feature: gene Location: 6006-6293 bp Feature: gene Location: 6401-7777 bp Ori: OKX58513.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6635-7241 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 6635-7241 bp Feature: gene Location: 7749-8300 bp Ori: OKX58514.1 Feature: domain Description: SLATT_5 Location: 7755-8271 bp Feature: domain Description: SLATT_5 Location: 7755-8271 bp Feature: gene Location: 8523-8771 bp Ori: OKX58515.1 Feature: domain Description: PRK10597 Location: 8526-8766 bp Feature: domain Description: PRK1 0597 Location: 8526-8766 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4094 (pfam13334), Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: LRLX01000085.1 Escherichia coli strain 703491 ctg7180000018151, whole genome shotgun sequence (4286 bp)
Overview 1 RT 1: 1612-4285 bp Neighborhood of RT #1 [1612, 4286] RVT-GII PHA02517 Feature: gene Location: 1612-1860 bp Feature: gene Location: 1895-2320 bp Feature: gene Location: 2274-3793 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2547-2781 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 547-2 781 bp Feature: gene Location: 3868-4286 bp Feature: domain Description: PHA02517 Location: 3877-4285 bp Feature: domain Description: PHA02 517 Location: 3877-42 85 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed)

Seq: LRLX01000189.1 Escherichia coli strain 703491 ctg7180000018259, whole genome shotgun sequence (110032 bp)
Overview 1 RT 1: 5302-8777 bp Neighborhood of RT #1 [5302, 8782] DUF4094 Peptidase_S74 RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 5302-6006 bp Ori: OKX56674.1 Feature: domain Description: DUF4094 Location: 5344-5434 bp Feature: domain Description: DUF4094 Location: 53 44-543 4 bp Feature: domain Description: Peptidase_S74 Location: 5650-5809 bp Feature: domain Description: Peptidase_S74 Location: 5650-5809 bp Feature: gene Location: 6017-6304 bp Feature: gene Location: 6412-7788 bp Ori: OKX56676.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6646-7252 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6646-7252 bp Feature: gene Location: 7760-8311 bp Ori: OKX56677.1 Feature: domain Description: SLATT_5 Location: 7766-8282 bp Feature: domain Description: SLATT_5 Location: 7766-8282 bp Feature: gene Location: 8534-8782 bp Ori: OKX56678.1 Feature: domain Description: PRK10597 Location: 8537-8777 bp Feature: domain Description: PRK10597 Location: 853 7-8777 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4094 (pfam13334), Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: LRLX01000203.1 Escherichia coli strain 703491 ctg7180000018273, whole genome shotgun sequence (70374 bp)
Overview 1 RT 1: 61418-64893 bp Neighborhood of RT #1 [61418, 64898] DUF4094 Peptidase_S74 RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 61418-62122 bp Ori: OKX54662.1 Feature: domain Description: DUF4094 Location: 61460-61550 bp Feature: domain Description: DUF4 094 Location: 614 60-61550 bp Feature: domain Description: Peptidase_S74 Location: 61766-61925 bp Feature: domain Description: Peptidase_S74 Location: 61766-61925 bp Feature: gene Location: 62133-62420 bp Feature: gene Location: 62528-63904 bp Ori: OKX54664.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 62762-63368 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 62762-63368 bp Feature: gene Location: 63876-64427 bp Ori: OKX54665.1 Feature: domain Description: SLATT_5 Location: 63882-64398 bp Feature: domain Description: SLATT_5 Location: 63882-64 398 bp Feature: gene Location: 64650-64898 bp Ori: OKX54666.1 Feature: domain Description: PRK10597 Location: 64653-64893 bp Feature: domain Description: PRK10597 Location: 64 653-64 893 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4094 (pfam13334), Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: LRLX01000213.1 Escherichia coli strain 703491 ctg7180000018284, whole genome shotgun sequence (178410 bp)
Overview 1 RT 1: 16285-23660 bp Neighborhood of RT #1 [16285, 23671] P Q RVT-AbiP2 Phage_GPA DUF5405 Feature: gene Location: 16285-18057 bp Ori: OKX53186.1 Feature: domain Description: P Location: 16312-18043 bp Feature: domain Description: P Location: 16312-18043 bp Feature: gene Location: 18057-19091 bp Ori: OKX53187.1 Feature: domain Description: Q Location: 18060-19083 bp Feature: domain Description: Q Location: 18060-19083 bp Feature: gene Location: 19469-21017 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 19886-20339 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 19886-20339 bp Feature: gene Location: 21121-23406 bp Ori: OKX53188.1 Feature: domain Description: Phage_GPA Location: 21520-22507 bp Feature: domain Description: Phage_GPA Location: 215 20-225 07 bp Feature: gene Location: 23396-23671 bp Ori: OKX53189.1 Feature: domain Description: DUF5405 Location: 23414-23660 bp Feature: domain Description: DUF5 405 Location: 23414-23660 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-AbiP2, Phage_GPA (pfam05840), DUF5405 (pfam17399)

Seq: LRLX01000073.1 Escherichia coli strain 703491 ctg7180000018139, whole genome shotgun sequence (15812 bp)
Overview 1 RT 1: 7538-12138 bp Neighborhood of RT #1 [7538, 12143] RVT-GII RVT-GII GIIM LacI PBP1_GntR Feature: gene Location: 7538-7882 bp Feature: gene Location: 8092-8430 bp Feature: gene Location: 9327-9761 bp Ori: OKX61819.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9519-9735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9519-9735 bp Feature: gene Location: 9779-10585 bp Ori: OKX61827.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9782-10145 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9782-10145 bp Feature: domain Description: GIIM Note: maturase Location: 10193-10415 bp Feature: domain Description: GIIM Note: maturase Location: 10193-10415 bp Feature: gene Location: 10763-10981 bp Feature: gene Location: 11112-12143 bp Ori: OKX61821.1 Feature: domain Description: LacI Location: 11154-11289 bp Feature: domain Description: LacI Location: 11154-11289 bp Feature: domain Description: PBP1_GntR Location: 11328-12138 bp Feature: domain Description: PBP1_GntR Location: 11328-12138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575)