myRT

myRT report for GCA_001911005.1_ASM191100v1

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Seq: LRKP01000122.1 Escherichia coli strain 100714 ctg7180000010783, whole genome shotgun sequence (30019 bp)
Overview 1 RT 1: 26932-30019 bp Neighborhood of RT #1 [26932, 30019] COG2085 PHA02517 RVT-GII GIIM Feature: gene Location: 26932-27345 bp Ori: OKV72915.1 Feature: domain Description: COG2085 Location: 27031-27178 bp Feature: domain Description: COG2085 Location: 27031 -271 78 bp Feature: gene Location: 27272-27765 bp Feature: domain Description: PHA02517 Location: 27281-27452 bp Feature: domain Description: PHA0251 7 Location: 27281 -27452 bp Feature: gene Location: 27840-29363 bp Ori: OKV72916.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28113-28845 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 281 1 3-28845 bp Feature: domain Description: GIIM Note: maturase Location: 28920-29118 bp Feature: domain Description: GIIM Note: maturase Location: 28920-291 1 8 bp Feature: gene Location: 29317-29742 bp Feature: gene Location: 29777-30019 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2085 (Predicted dinucleotide-binding enzyme ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: LRKP01000056.1 Escherichia coli strain 100714 ctg7180000010716, whole genome shotgun sequence (7673 bp)
Overview 1 RT 1: 5457-7397 bp Neighborhood of RT #1 [5457, 7642] RVT-GII GIIM Feature: gene Location: 5457-5705 bp Feature: gene Location: 5740-6165 bp Feature: gene Location: 6119-7642 bp Ori: OKV78576.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6392-7124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6392 -712 4 bp Feature: domain Description: GIIM Note: maturase Location: 7199-7397 bp Feature: domain Description: GIIM Note: maturase Location: 7199-7397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LRKP01000034.1 Escherichia coli strain 100714 ctg7180000010694, whole genome shotgun sequence (67027 bp)
Overview 1 RT 1: 57070-60093 bp 2 RT 2: 64808-66751 bp Neighborhood of RT #1 [57070, 60110] HTH_38 Tra8 InsE RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66_C Neighborhood of RT #2 [64808, 66996] RVT-GII GIIM Feature: gene Location: 57070-58221 bp Ori: OKV81837.1 Feature: domain Description: HTH_38 Location: 57079-57193 bp Feature: domain Description: HTH_3 8 Location: 57079-57193 bp Feature: domain Description: Tra8 Location: 57229-58210 bp Feature: domain Description: Tra8 Location: 57229-58210 bp Feature: gene Location: 58178-58546 bp Ori: OKV81838.1 Feature: domain Description: InsE Location: 58181-58472 bp Feature: domain Description: InsE Location: 58181-58472 bp Feature: gene Location: 58594-59058 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58630-59005 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5863 0-59005 bp Feature: gene Location: 59051-59329 bp Feature: gene Location: 59370-60110 bp Ori: OKV81840.1 Feature: domain Description: DDE_Tnp_IS66 Location: 59394-59961 bp Feature: domain Description: DDE_Tnp_IS66 Location: 593 94-59961 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 59982-60093 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 59982-60093 bp Feature: gene Location: 64808-65059 bp Feature: gene Location: 65094-65519 bp Feature: gene Location: 65473-66996 bp Ori: OKV81849.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65746-66478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65746-66478 bp Feature: domain Description: GIIM Note: maturase Location: 66553-66751 bp Feature: domain Description: GIIM Note: maturase Location: 66553 -66751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_38 (pfam13936), Tra8 (COG2826), InsE (COG2963), RVT-GII, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), GIIM (pfam08388)