myRT

myRT report for GCA_001911085.1_ASM191108v1

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Seq: LRKU01000103.1 Escherichia coli strain 300783 ctg7180000026141, whole genome shotgun sequence (10393 bp)
Overview 1 RT 1: 7331-10345 bp Neighborhood of RT #1 [7331, 10365] HTH_XRE PRK09956 RVT_N RVT-GII InsE Feature: gene Location: 7331-7582 bp Feature: domain Description: HTH_XRE Location: 7346-7445 bp Feature: domain Description: HTH_XRE Location: 7346-7445 bp Feature: gene Location: 8069-9010 bp Feature: domain Description: PRK09956 Location: 8090-8999 bp Feature: domain Description: PRK09956 Location: 8090-8999 bp Feature: gene Location: 9222-9854 bp Feature: RT Description: RVT_N Location: 9270-9507 bp Feature: RT Description: RVT_N Location: 9270-9507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9558-9852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9558-9852 bp Feature: gene Location: 9940-10365 bp Feature: domain Description: InsE Location: 9955-10345 bp Feature: domain Description: InsE Location: 9955-1 0345 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), PRK09956 (ISNCY family transposase), RVT_N (pfam13655), RVT-GII, InsE (COG2963)

Seq: LRKU01000134.1 Escherichia coli strain 300783 ctg7180000026172, whole genome shotgun sequence (4537 bp)
Overview 1 RT 1: 1-2651 bp Neighborhood of RT #1 [1, 2651] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM HNHc ArdA Feature: gene Location: 1-462 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-307 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4-307 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 331-439 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 331-439 bp Feature: gene Location: 519-1535 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 522-846 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 2 -846 bp Feature: domain Description: GIIM Note: maturase Location: 897-1131 bp Feature: domain Description: GIIM Note: maturase Location: 897-1131 bp Feature: domain Description: HNHc Note: nucleases Location: 1341-1500 bp Feature: domain Description: HNHc Note: nucleases Location: 1341-1500 bp Feature: gene Location: 1792-2292 bp Feature: domain Description: ArdA Location: 1807-2281 bp Feature: domain Description: ArdA Location: 1807-2 2 81 bp Feature: gene Location: 2213-2651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), ArdA (pfam07275), RVT-GII, GIIM (pfam08388), HNHc (smart00507)