myRT

myRT report for GCA_001911095.1_ASM191109v1

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Seq: LRKW01000082.1 Escherichia coli strain 302555 ctg7180000029943, whole genome shotgun sequence (3193 bp)
Overview 1 RT 1: 1-1933 bp Neighborhood of RT #1 [1, 1933] RVT-GII GIIM Feature: gene Location: 1-1271 bp Ori: OKV93236.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-1 006 bp Feature: domain Description: GIIM Note: maturase Location: 1081-1270 bp Feature: domain Description: GIIM Note: maturase Location: 1 081 -1 270 bp Feature: gene Location: 1225-1650 bp Feature: gene Location: 1685-1933 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LRKW01000143.1 Escherichia coli strain 302555 ctg7180000030006, whole genome shotgun sequence (383519 bp)
Overview 1 RT 1: 345353-349990 bp Neighborhood of RT #1 [345353, 349990] PRK13889 RVT-Retrons HTH_XRE Feature: gene Location: 345353-345790 bp Feature: gene Location: 346731-348233 bp Ori: OKV88324.1 Feature: domain Description: PRK13889 Location: 346734-347313 bp Feature: domain Description: PRK13889 Location: 346734-347313 bp Feature: gene Location: 348310-349410 bp Ori: OKV88325.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 348451-349003 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 348451-349003 bp Feature: gene Location: 349403-349684 bp Ori: OKV88326.1 Feature: domain Description: HTH_XRE Location: 349418-349583 bp Feature: domain Description: HTH_XRE Location: 349418-349583 bp Feature: gene Location: 349775-349990 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, HTH_XRE (smart00530)

Seq: LRKW01000100.1 Escherichia coli strain 302555 ctg7180000029961, whole genome shotgun sequence (2296 bp)
Overview 1 RT 1: 1-1936 bp Neighborhood of RT #1 [1, 1936] RVT-GII GIIM Feature: gene Location: 1-1271 bp Ori: OKV92571.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-1006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 274-1006 bp Feature: domain Description: GIIM Note: maturase Location: 1081-1270 bp Feature: domain Description: GIIM Note: maturase Location: 1081-1270 bp Feature: gene Location: 1225-1650 bp Feature: gene Location: 1685-1936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)