myRT

myRT report for GCA_001911175.1_ASM191117v1

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Seq: LRLH01000132.1 Escherichia coli strain 402878 ctg7180000013205, whole genome shotgun sequence (57164 bp)
Overview 1 RT 1: 51602-55484 bp Neighborhood of RT #1 [51602, 55489] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51602-52060 bp Ori: OKW45618.1 Feature: domain Description: dut Location: 51608-52055 bp Feature: domain Description: dut Location: 51 608-52055 bp Feature: gene Location: 52167-52763 bp Ori: OKW45619.1 Feature: domain Description: slmA Location: 52173-52749 bp Feature: domain Description: slmA Location: 521 73-52749 bp Feature: gene Location: 52809-53768 bp Ori: OKW45620.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52944-53493 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 52944-53493 bp Feature: gene Location: 54066-54707 bp Ori: OKW45621.1 Feature: domain Description: pyrE Location: 54069-54702 bp Feature: domain Description: pyrE Location: 54069-54702 bp Feature: gene Location: 54773-55489 bp Ori: OKW45622.1 Feature: domain Description: rph Location: 54776-55484 bp Feature: domain Description: rph Location: 54776-55484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: LRLH01000112.1 Escherichia coli strain 402878 ctg7180000013185, whole genome shotgun sequence (3955 bp)
Overview 1 RT 1: 1246-3911 bp Neighborhood of RT #1 [1246, 3913] RVT-GII GIIM PHA02517 Feature: gene Location: 1246-1413 bp Feature: gene Location: 1448-1873 bp Feature: gene Location: 1827-3350 bp Ori: OKW48681.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2100-2832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 100-2 832 bp Feature: domain Description: GIIM Note: maturase Location: 2907-3105 bp Feature: domain Description: GIIM Note: maturase Location: 2 907-3105 bp Feature: gene Location: 3425-3913 bp Ori: OKW48682.1 Feature: domain Description: PHA02517 Location: 3434-3911 bp Feature: domain Description: PHA02 517 Location: 3434-3911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)