myRT

myRT report for GCA_001911255.1_ASM191125v1

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Seq: LRLS01000319.1 Escherichia coli strain 403398 ctg7180000024859, whole genome shotgun sequence (31621 bp)
Overview 1 RT 1: 19048-22523 bp Neighborhood of RT #1 [19048, 22523] Y1_Tnp RVT_N RVT-GII GIIM Feature: gene Location: 19048-19452 bp Feature: domain Description: Y1_Tnp Location: 19093-19444 bp Feature: domain Description: Y1 _Tnp Location: 1 9093-1 9444 bp Feature: gene Location: 19428-19649 bp Feature: gene Location: 19963-21638 bp Feature: RT Description: RVT_N Location: 20020-20257 bp Feature: RT Description: RVT_N Location: 20020-20257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20308-20950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20308-20950 bp Feature: domain Description: GIIM Note: maturase Location: 21001-21235 bp Feature: domain Description: GIIM Note: maturase Location: 21 001 -21 235 bp Feature: gene Location: 22172-22360 bp Feature: gene Location: 22360-22523 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Y1_Tnp (pfam01797), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LRLS01000344.1 Escherichia coli strain 403398 ctg7180000024884, whole genome shotgun sequence (186825 bp)
Overview 1 RT 1: 51731-55613 bp Neighborhood of RT #1 [51731, 55618] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 51731-52189 bp Feature: domain Description: dut Location: 51737-52184 bp Feature: domain Description: dut Location: 51737-52 184 bp Feature: gene Location: 52296-52892 bp Feature: domain Description: slmA Location: 52302-52878 bp Feature: domain Description: slmA Location: 52 302 -52 878 bp Feature: gene Location: 52938-53897 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53073-53622 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53073-5362 2 bp Feature: gene Location: 54195-54836 bp Feature: domain Description: pyrE Location: 54198-54831 bp Feature: domain Description: pyrE Location: 54198-54831 bp Feature: gene Location: 54902-55618 bp Feature: domain Description: rph Location: 54905-55613 bp Feature: domain Description: rph Location: 54905-55613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)