myRT

myRT report for GCA_001911555.1_ASM191155v1

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Seq: LGML01000064.1 Escherichia coli strain 700377 ctg7180000088932, whole genome shotgun sequence (55713 bp)
Overview 1 RT 1: 13240-17196 bp Neighborhood of RT #1 [13240, 17201] TIGR02646 COG3950 RVT-Retrons DinI Feature: gene Location: 13240-13923 bp Ori: OKT77748.1 Feature: domain Description: TIGR02646 Location: 13306-13711 bp Feature: domain Description: TIGR02646 Location: 1 3306-1 371 1 bp Feature: gene Location: 13920-15554 bp Ori: OKT77749.1 Feature: domain Description: COG3950 Location: 14058-15516 bp Feature: domain Description: COG3950 Location: 1 4058-1 551 6 bp Feature: gene Location: 15554-16489 bp Ori: OKT77750.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15656-16250 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5656-1 6250 bp Feature: gene Location: 16665-16871 bp Feature: gene Location: 16968-17201 bp Ori: OKT77751.1 Feature: domain Description: DinI Location: 17010-17196 bp Feature: domain Description: DinI Location: 1 701 0-1 71 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, DinI (pfam06183)

Seq: LGML01000195.1 Escherichia coli strain 700377 ctg7180000089064, whole genome shotgun sequence (17896 bp)
Overview 1 RT 1: 8903-11996 bp Neighborhood of RT #1 [8903, 11996] COG2085 PHA02517 RVT-GII GIIM Feature: gene Location: 8903-9316 bp Ori: OKT70305.1 Feature: domain Description: COG2085 Location: 9002-9149 bp Feature: domain Description: COG2 085 Location: 9002 -9149 bp Feature: gene Location: 9243-9736 bp Feature: domain Description: PHA02517 Location: 9252-9423 bp Feature: domain Description: PHA02 517 Location: 92 52 -942 3 bp Feature: gene Location: 9811-11334 bp Ori: OKT70306.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10084-10816 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10084-10816 bp Feature: domain Description: GIIM Note: maturase Location: 10891-11089 bp Feature: domain Description: GIIM Note: maturase Location: 10891-11089 bp Feature: gene Location: 11288-11713 bp Feature: gene Location: 11748-11996 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2085 (Predicted dinucleotide-binding enzyme ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)