myRT

myRT report for GCA_001911635.1_ASM191163v1

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Seq: LGMW01000115.1 Escherichia coli strain 402594 ctg7180000021163, whole genome shotgun sequence (24231 bp)
Overview 1 RT 1: 13010-16156 bp Neighborhood of RT #1 [13010, 16156] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 13010-13216 bp Feature: gene Location: 13449-13637 bp Feature: gene Location: 14171-15847 bp Ori: OKU27940.1 Feature: domain Description: RVT_N Location: 14228-14465 bp Feature: domain Description: RVT_N Location: 1 4228-1 4465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14516-15158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 451 6-1 51 58 bp Feature: domain Description: GIIM Note: maturase Location: 15209-15443 bp Feature: domain Description: GIIM Note: maturase Location: 1 5209-1 5443 bp Feature: domain Description: HNHc Note: nucleases Location: 15653-15812 bp Feature: domain Description: HNHc Note: nucleases Location: 1 5653-1 581 2 bp Feature: gene Location: 15825-16010 bp Feature: gene Location: 16048-16156 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: LGMW01000137.1 Escherichia coli strain 402594 ctg7180000021185, whole genome shotgun sequence (253974 bp)
Overview 1 RT 1: 227466-233844 bp Neighborhood of RT #1 [227466, 233864] XdhC PBP2_CrgA_like_5 RVT-UG8 RVT-UG3 PRK09678 Psu Feature: gene Location: 227466-228422 bp Ori: OKU25278.1 Feature: domain Description: XdhC Location: 227544-228399 bp Feature: domain Description: XdhC Location: 2 2 7544-2 2 8399 bp Feature: gene Location: 228401-228811 bp Ori: OKU25279.1 Feature: domain Description: PBP2_CrgA_like_5 Location: 228473-228785 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 2 2 8473-2 2 8785 bp Feature: gene Location: 229354-231372 bp Ori: OKU25280.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 229927-230380 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 2 992 7-2 30380 bp Feature: gene Location: 231363-232640 bp Ori: OKU25281.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 231651-232146 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 31651-2 32 146 bp Feature: gene Location: 233035-233307 bp Ori: OKU25282.1 Feature: domain Description: PRK09678 Location: 233044-233209 bp Feature: domain Description: PRK09678 Location: 2 33044-2 332 09 bp Feature: gene Location: 233313-233864 bp Ori: OKU25283.1 Feature: domain Description: Psu Location: 233334-233844 bp Feature: domain Description: Psu Location: 2 33334-2 33844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-UG8, RVT-UG3, PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455)