myRT

myRT report for GCA_001911745.1_ASM191174v1

Download annotations/find similar RTs

Seq: LGMH01000081.1 Escherichia coli strain 9343a ctg986911828, whole genome shotgun sequence (6796 bp)
Overview 1 RT 1: 4707-6797 bp Neighborhood of RT #1 [4707, 6796] DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII InsE HTH_38 HTH_38 Feature: gene Location: 4707-5447 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4731-5298 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4731 -5298 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5319-5430 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 531 9-5430 bp Feature: gene Location: 5488-5766 bp Feature: gene Location: 5759-6223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5795-6170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5795-61 70 bp Feature: gene Location: 6271-6639 bp Feature: domain Description: InsE Location: 6274-6565 bp Feature: domain Description: InsE Location: 6274-6565 bp Feature: gene Location: 6596-6796 bp Feature: domain Description: HTH_38 Location: 6605-6719 bp Feature: domain Description: HTH_38 Location: 6605-671 9 bp Feature: domain Description: HTH_38 Location: 6770-6797 bp Feature: domain Description: HTH_38 Location: 6770-6797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, InsE (COG2963), HTH_38 (pfam13936)