myRT

myRT report for GCA_001911845.1_ASM191184v1

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Seq: LGNB01000110.1 Escherichia coli strain 403418 ctg7180000017861, whole genome shotgun sequence (23818 bp)
Overview 1 RT 1: 14893-17986 bp Neighborhood of RT #1 [14893, 17986] COG2085 PHA02517 RVT-GII GIIM Feature: gene Location: 14893-15306 bp Ori: OKU36309.1 Feature: domain Description: COG2085 Location: 14992-15139 bp Feature: domain Description: COG2085 Location: 1 4992-1 51 39 bp Feature: gene Location: 15233-15726 bp Feature: domain Description: PHA02517 Location: 15242-15413 bp Feature: domain Description: PHA0251 7 Location: 1 5242-1 541 3 bp Feature: gene Location: 15801-17324 bp Ori: OKU36310.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16074-16806 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6074-1 6806 bp Feature: domain Description: GIIM Note: maturase Location: 16881-17079 bp Feature: domain Description: GIIM Note: maturase Location: 1 6881 -1 7079 bp Feature: gene Location: 17278-17703 bp Feature: gene Location: 17738-17986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2085 (Predicted dinucleotide-binding enzyme ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: LGNB01000085.1 Escherichia coli strain 403418 ctg7180000017834, whole genome shotgun sequence (459118 bp)
Overview 1 RT 1: 24443-29080 bp Neighborhood of RT #1 [24443, 29080] PRK13889 RVT-Retrons HTH_XRE Feature: gene Location: 24443-24880 bp Feature: gene Location: 25821-27323 bp Ori: OKU40765.1 Feature: domain Description: PRK13889 Location: 25824-26403 bp Feature: domain Description: PRK13889 Location: 2 582 4-2 6403 bp Feature: gene Location: 27400-28500 bp Ori: OKU40766.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 27541-28093 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 7541-2 8093 bp Feature: gene Location: 28493-28774 bp Ori: OKU40767.1 Feature: domain Description: HTH_XRE Location: 28508-28673 bp Feature: domain Description: HTH_XRE Location: 2 8508-2 8673 bp Feature: gene Location: 28865-29080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13889 (conjugal transfer relaxase TraA; Provisional), RVT-Retrons, HTH_XRE (smart00530)