myRT

myRT report for GCA_001912055.1_ASM191205v1

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Seq: LGMO01000130.1 Escherichia coli strain 200617 ctg7180000021745, whole genome shotgun sequence (45056 bp)
Overview 1 RT 1: 17739-22376 bp Neighborhood of RT #1 [17739, 22376] HTH_XRE RVT-Retrons PRK13889 Feature: gene Location: 17739-17954 bp Feature: gene Location: 18045-18326 bp Ori: OKT68569.1 Feature: domain Description: HTH_XRE Location: 18060-18225 bp Feature: domain Description: HTH_XRE Location: 1 8060-1 8225 bp Feature: gene Location: 18319-19419 bp Ori: OKT68570.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18460-19012 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 8460-1 901 2 bp Feature: gene Location: 19496-20998 bp Ori: OKT68571.1 Feature: domain Description: PRK13889 Location: 19499-20078 bp Feature: domain Description: PRK1 3889 Location: 1 9499-20078 bp Feature: gene Location: 21939-22376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional)

Seq: LGMO01000145.1 Escherichia coli strain 200617 ctg7180000021760, whole genome shotgun sequence (131647 bp)
Overview 1 RT 1: 68108-74488 bp Neighborhood of RT #1 [68108, 74488] AbiEii AbiEi_3_N AbiEi_3 RVT-UG5 nitrilase Feature: gene Location: 68108-69028 bp Ori: OKT67124.1 Feature: domain Description: AbiEii Location: 68150-68891 bp Feature: domain Description: AbiEii Location: 68150-68891 bp Feature: gene Location: 69015-69818 bp Ori: OKT67125.1 Feature: domain Description: AbiEi_3_N Location: 69048-69309 bp Feature: domain Description: AbiEi_3_N Location: 69048-69309 bp Feature: domain Description: AbiEi_3 Location: 69321-69777 bp Feature: domain Description: AbiEi_3 Location: 6932 1-69777 bp Feature: gene Location: 70113-73322 bp Ori: OKT67126.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 70641-71130 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 70641-71130 bp Feature: domain Description: nitrilase Location: 72636-73233 bp Feature: domain Description: nitrilase Location: 72 636-732 33 bp Feature: gene Location: 73669-74139 bp Feature: gene Location: 74222-74488 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AbiEii (pfam08843), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), RVT-UG5, nitrilase (cl11424)