myRT

myRT report for GCA_001912195.1_ASM191219v1

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Seq: LRAK01000064.1 Escherichia coli strain 602748 ctg7180000025294, whole genome shotgun sequence (28210 bp)
Overview 1 RT 1: 6471-11833 bp Neighborhood of RT #1 [6471, 11835] PLDc_N_DEXD_c DEXDc_RapA SF2_C_SNF HTH_17 RVT-GII YeeP Feature: gene Location: 6471-9737 bp Ori: OKU82539.1 Feature: domain Description: PLDc_N_DEXD_c Location: 6486-6897 bp Feature: domain Description: PLDc_N_DEXD_c Location: 6486-6897 bp Feature: domain Description: DEXDc_RapA Location: 7158-7725 bp Feature: domain Description: DEXDc_RapA Location: 71 58-7725 bp Feature: domain Description: SF2_C_SNF Location: 8304-8898 bp Feature: domain Description: SF2_C_SNF Location: 8304-8898 bp Feature: gene Location: 9752-9931 bp Ori: OKU82540.1 Feature: domain Description: HTH_17 Location: 9770-9914 bp Feature: domain Description: HTH_1 7 Location: 9770-991 4 bp Feature: gene Location: 10220-10532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10226-10316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0226-1 031 6 bp Feature: gene Location: 10492-10734 bp Feature: gene Location: 10960-11835 bp Ori: OKU82541.1 Feature: domain Description: YeeP Location: 10975-11833 bp Feature: domain Description: YeeP Location: 1 0975-1 1 833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_N_DEXD_c (cd10311), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793), HTH_17 (pfam12728), RVT-GII, YeeP (COG3596)

Seq: LRAK01000217.1 Escherichia coli strain 602748 ctg7180000025448, whole genome shotgun sequence (25384 bp)
Overview 1 RT 1: 22625-25316 bp Neighborhood of RT #1 [22625, 25384] Ogr_Delta PHA02517 RVT-GII DDE_Tnp_1 Feature: gene Location: 22625-22885 bp Ori: OKU73965.1 Feature: domain Description: Ogr_Delta Location: 22634-22775 bp Feature: domain Description: Ogr_Delta Location: 2 2 634-2 2 775 bp Feature: gene Location: 22999-23493 bp Ori: OKU73966.1 Feature: domain Description: PHA02517 Location: 23008-23482 bp Feature: domain Description: PHA02 517 Location: 2 3008-2 3482 bp Feature: gene Location: 23568-24516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23577-23739 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 3577-2 3739 bp Feature: gene Location: 24961-25101 bp Feature: gene Location: 25124-25384 bp Ori: OKU73968.1 Feature: domain Description: DDE_Tnp_1 Location: 25130-25316 bp Feature: domain Description: DDE_Tnp_1 Location: 2 5130-2 5316 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Ogr_Delta (pfam04606), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, DDE_Tnp_1 (pfam01609)