myRT

myRT report for GCA_001912305.1_ASM191230v1

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Seq: LRKQ01000151.1 Escherichia coli strain 102265 ctg7180000017829, whole genome shotgun sequence (67274 bp)
Overview 1 RT 1: 13221-17103 bp Neighborhood of RT #1 [13221, 17108] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 13221-13937 bp Ori: OKV62933.1 Feature: domain Description: rph Location: 13224-13932 bp Feature: domain Description: rph Location: 1 3224-1 3932 bp Feature: gene Location: 14003-14644 bp Ori: OKV62934.1 Feature: domain Description: pyrE Location: 14006-14639 bp Feature: domain Description: pyrE Location: 1 4006-1 4639 bp Feature: gene Location: 14942-15901 bp Ori: OKV62935.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 15077-15626 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 5077-1 5626 bp Feature: gene Location: 15947-16543 bp Ori: OKV62936.1 Feature: domain Description: slmA Location: 15953-16529 bp Feature: domain Description: slmA Location: 1 5953-1 6529 bp Feature: gene Location: 16650-17108 bp Ori: OKV62937.1 Feature: domain Description: dut Location: 16656-17103 bp Feature: domain Description: dut Location: 1 6656-1 71 03 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: LRKQ01000052.1 Escherichia coli strain 102265 ctg7180000017730, whole genome shotgun sequence (4517 bp)
Overview 1 RT 1: 1862-4518 bp Neighborhood of RT #1 [1862, 4517] RVT-GII GIIM PHA02517 Feature: gene Location: 1862-2029 bp Feature: gene Location: 2064-2489 bp Feature: gene Location: 2443-3966 bp Ori: OKV70572.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2716-3448 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 716-3448 bp Feature: domain Description: GIIM Note: maturase Location: 3523-3721 bp Feature: domain Description: GIIM Note: maturase Location: 352 3-372 1 bp Feature: gene Location: 4041-4517 bp Ori: OKV70573.1 Feature: domain Description: PHA02517 Location: 4050-4518 bp Feature: domain Description: PHA02 517 Location: 4050-4518 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)