myRT

myRT report for GCA_001912525.1_ASM191252v1

Download annotations/find similar RTs

Seq: LRMD01000096.1 Escherichia coli strain 601028 ctg7180000010784, whole genome shotgun sequence (135942 bp)
Overview 1 RT 1: 520-3924 bp Neighborhood of RT #1 [520, 3924] RVT-GII GIIM YhhI YhhI YhhI Feature: gene Location: 520-1731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 685-1342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 685-1 342 bp Feature: domain Description: GIIM Note: maturase Location: 1432-1639 bp Feature: domain Description: GIIM Note: maturase Location: 1 432-1 639 bp Feature: gene Location: 1938-3074 bp Feature: domain Description: YhhI Location: 1941-2304 bp Feature: domain Description: YhhI Location: 1 941 -2304 bp Feature: domain Description: YhhI Location: 2361-2715 bp Feature: domain Description: YhhI Location: 2361 -271 5 bp Feature: domain Description: YhhI Location: 2733-2982 bp Feature: domain Description: YhhI Location: 2733-2982 bp Feature: gene Location: 3289-3924 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388)

Seq: LRMD01000123.1 Escherichia coli strain 601028 ctg7180000010812, whole genome shotgun sequence (65274 bp)
Overview 1 RT 1: 520-3275 bp Neighborhood of RT #1 [520, 3337] RVT-GII GIIM YhhI YhhI YhhI RHS_repeat RHS_repeat Feature: gene Location: 520-1731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 685-1342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 685-1342 bp Feature: domain Description: GIIM Note: maturase Location: 1432-1639 bp Feature: domain Description: GIIM Note: maturase Location: 1432 -1639 bp Feature: gene Location: 1807-2940 bp Feature: domain Description: YhhI Location: 1810-2173 bp Feature: domain Description: YhhI Location: 1810-2 173 bp Feature: domain Description: YhhI Location: 2230-2584 bp Feature: domain Description: YhhI Location: 2 2 30-2 584 bp Feature: domain Description: YhhI Location: 2602-2839 bp Feature: domain Description: YhhI Location: 2 602 -2 839 bp Feature: gene Location: 3053-3337 bp Feature: domain Description: RHS_repeat Location: 3101-3170 bp Feature: domain Description: RHS_repeat Location: 3101-3170 bp Feature: domain Description: RHS_repeat Location: 3182-3275 bp Feature: domain Description: RHS_repeat Location: 3182 -32 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RHS_repeat (pfam05593), RVT-GII, GIIM (pfam08388)

Seq: LRMD01000043.1 Escherichia coli strain 601028 ctg7180000010733, whole genome shotgun sequence (7994 bp)
Overview 1 RT 1: 78-6591 bp Neighborhood of RT #1 [78, 6938] RVT-GII GIIM RhsA RHS_repeat RhsA Feature: gene Location: 78-1289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243-900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243 -900 bp Feature: domain Description: GIIM Note: maturase Location: 990-1197 bp Feature: domain Description: GIIM Note: maturase Location: 990-1197 bp Feature: gene Location: 2137-2754 bp Feature: gene Location: 2754-6938 bp Feature: domain Description: RhsA Location: 3720-4188 bp Feature: domain Description: RhsA Location: 3 720-4188 bp Feature: domain Description: RHS_repeat Location: 4248-4365 bp Feature: domain Description: RHS_repeat Location: 4248-43 65 bp Feature: domain Description: RhsA Location: 4386-6591 bp Feature: domain Description: RhsA Location: 43 86-6591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RhsA (COG3209), RHS_repeat (pfam05593), RVT-GII, GIIM (pfam08388)