myRT

myRT report for GCA_001912615.1_ASM191261v1

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Seq: LRKM01000117.1 Escherichia coli strain 500487 ctg7180000023817, whole genome shotgun sequence (25351 bp)
Overview 1 RT 1: 1-2644 bp Neighborhood of RT #1 [1, 2754] DDE_Tnp_1 RVT-GII PHA02517 Ogr_Delta Feature: gene Location: 1-255 bp Ori: OKV71639.1 Feature: domain Description: DDE_Tnp_1 Location: 7-187 bp Feature: domain Description: DDE_Tnp_1 Location: 7-1 87 bp Feature: gene Location: 278-418 bp Feature: gene Location: 863-1811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872-1034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 872-1 034 bp Feature: gene Location: 1886-2380 bp Ori: OKV71641.1 Feature: domain Description: PHA02517 Location: 1895-2369 bp Feature: domain Description: PHA0251 7 Location: 1 895-2369 bp Feature: gene Location: 2494-2754 bp Ori: OKV71642.1 Feature: domain Description: Ogr_Delta Location: 2503-2644 bp Feature: domain Description: Ogr_Delta Location: 2503-2644 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), Ogr_Delta (pfam04606)

Seq: LRKM01000223.1 Escherichia coli strain 500487 ctg7180000023923, whole genome shotgun sequence (27931 bp)
Overview 1 RT 1: 16391-20916 bp Neighborhood of RT #1 [16391, 21755] YeeP RVT-GII HTH_17 PLDc_N_DEXD_c DEXDc_RapA SF2_C_SNF Feature: gene Location: 16391-17266 bp Ori: OKV67494.1 Feature: domain Description: YeeP Location: 16406-17264 bp Feature: domain Description: YeeP Location: 16406-172 64 bp Feature: gene Location: 17492-17734 bp Feature: gene Location: 17694-18006 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17700-17790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17700-17790 bp Feature: gene Location: 18295-18474 bp Ori: OKV67495.1 Feature: domain Description: HTH_17 Location: 18313-18457 bp Feature: domain Description: HTH_17 Location: 18313-18457 bp Feature: gene Location: 18489-21755 bp Ori: OKV67496.1 Feature: domain Description: PLDc_N_DEXD_c Location: 18504-18915 bp Feature: domain Description: PLDc_N_DEXD_c Location: 18504-18915 bp Feature: domain Description: DEXDc_RapA Location: 19176-19743 bp Feature: domain Description: DEXDc_RapA Location: 19176-19743 bp Feature: domain Description: SF2_C_SNF Location: 20322-20916 bp Feature: domain Description: SF2 _C_SNF Location: 2 032 2 -2 0916 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeP (COG3596), RVT-GII, HTH_17 (pfam12728), PLDc_N_DEXD_c (cd10311), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793)