myRT

myRT report for GCA_001912675.1_ASM191267v1

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Seq: LRKX01000086.1 Escherichia coli strain 602646 ctg7180000013100, whole genome shotgun sequence (28846 bp)
Overview 1 RT 1: 7100-12462 bp Neighborhood of RT #1 [7100, 12464] PLDc_N_DEXD_c DEXDc_RapA SF2_C_SNF HTH_17 RVT-GII YeeP Feature: gene Location: 7100-10366 bp Ori: OKW06094.1 Feature: domain Description: PLDc_N_DEXD_c Location: 7115-7526 bp Feature: domain Description: PLDc_N_DEXD_c Location: 71 1 5-7526 bp Feature: domain Description: DEXDc_RapA Location: 7787-8354 bp Feature: domain Description: DEXDc_RapA Location: 7787-8354 bp Feature: domain Description: SF2_C_SNF Location: 8933-9527 bp Feature: domain Description: SF2_C_SNF Location: 8933-9527 bp Feature: gene Location: 10381-10560 bp Ori: OKW06095.1 Feature: domain Description: HTH_17 Location: 10399-10543 bp Feature: domain Description: HTH_1 7 Location: 1 0399-1 0543 bp Feature: gene Location: 10849-11161 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10855-10945 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0855-1 0945 bp Feature: gene Location: 11121-11363 bp Feature: gene Location: 11589-12464 bp Ori: OKW06096.1 Feature: domain Description: YeeP Location: 11604-12462 bp Feature: domain Description: YeeP Location: 1 1 604-1 2462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PLDc_N_DEXD_c (cd10311), DEXDc_RapA (cd18011), SF2_C_SNF (cd18793), HTH_17 (pfam12728), RVT-GII, YeeP (COG3596)

Seq: LRKX01000097.1 Escherichia coli strain 602646 ctg7180000013111, whole genome shotgun sequence (23387 bp)
Overview 1 RT 1: 1-3012 bp Neighborhood of RT #1 [1, 3122] RVT-GII PHA02517 Ogr_Delta Feature: gene Location: 1-623 bp Feature: gene Location: 646-786 bp Feature: gene Location: 1231-2179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1240-1402 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 40-1402 bp Feature: gene Location: 2254-2748 bp Ori: OKW05548.1 Feature: domain Description: PHA02517 Location: 2263-2737 bp Feature: domain Description: PHA02 517 Location: 2 2 63-2 737 bp Feature: gene Location: 2862-3122 bp Ori: OKW05549.1 Feature: domain Description: Ogr_Delta Location: 2871-3012 bp Feature: domain Description: Ogr_Delta Location: 2 871-3012 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PHA02517 (putative transposase OrfB; Reviewed), Ogr_Delta (pfam04606)