myRT

myRT report for GCA_001913615.1_ASM191361v1

Download annotations/find similar RTs

Seq: MIFR01000001.1 Bacillus cereus strain MOD1_Bc18 Bc18_contig_1, whole genome shotgun sequence (41692 bp)
Overview 1 RT 1: 1559-7641 bp Neighborhood of RT #1 [1559, 7641] YolD RVT-GII PRK03103 Feature: gene Location: 1559-1933 bp Feature: gene Location: 1984-2310 bp Feature: domain Description: YolD Location: 2032-2308 bp Feature: domain Description: YolD Location: 2032-2308 bp Feature: gene Location: 2449-4431 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2770-3502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2770-3502 bp Feature: gene Location: 5218-6486 bp Feature: domain Description: PRK03103 Location: 5251-6478 bp Feature: domain Description: PRK031 03 Location: 5251 -6478 bp Feature: gene Location: 6985-7641 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YolD (pfam08863), RVT-GII, PRK03103 (DNA polymerase IV; Reviewed)

Seq: MIFR01000028.1 Bacillus cereus strain MOD1_Bc18 Bc18_contig_28, whole genome shotgun sequence (35866 bp)
Overview 1 RT 1: 12966-18169 bp Neighborhood of RT #1 [12966, 18234] HTH_psq HNHc RVT-GII RimL HTH_36 Feature: gene Location: 12966-13490 bp Feature: domain Description: HTH_psq Location: 13137-13188 bp Feature: domain Description: HTH_psq Location: 13137-13188 bp Feature: gene Location: 14216-14872 bp Feature: domain Description: HNHc Note: nucleases Location: 14666-14759 bp Feature: domain Description: HNHc Note: nucleases Location: 14666-14759 bp Feature: gene Location: 15121-15978 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15382-15967 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15382 -15967 bp Feature: gene Location: 16810-17355 bp Feature: domain Description: RimL Location: 16840-17350 bp Feature: domain Description: RimL Location: 16840-17350 bp Feature: gene Location: 17974-18234 bp Feature: domain Description: HTH_36 Location: 18034-18169 bp Feature: domain Description: HTH_36 Location: 18034-18169 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_psq (pfam05225), HNHc (smart00507), RVT-GII, RimL (COG1670), HTH_36 (pfam13730)

Seq: MIFR01000057.1 Bacillus cereus strain MOD1_Bc18 Bc18_contig_57, whole genome shotgun sequence (24695 bp)
Overview 1 RT 1: 13823-22570 bp Neighborhood of RT #1 [13823, 22647] TrbL TraC-F-type RVT-GII HNHc TraC-F-type Feature: gene Location: 13823-17827 bp Feature: domain Description: TrbL Location: 14312-14585 bp Feature: domain Description: TrbL Location: 143 12-14585 bp Feature: gene Location: 17858-18817 bp Feature: domain Description: TraC-F-type Location: 17876-18656 bp Feature: domain Description: TraC-F-type Location: 17876-18656 bp Feature: gene Location: 19118-20950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19418-20123 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19418-20123 bp Feature: domain Description: HNHc Note: nucleases Location: 20702-20834 bp Feature: domain Description: HNHc Note: nucleases Location: 20702-2083 4 bp Feature: gene Location: 21244-21378 bp Feature: gene Location: 21679-22647 bp Feature: domain Description: TraC-F-type Location: 22096-22570 bp Feature: domain Description: TraC-F-type Location: 22096-22570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbL (pfam04610), TraC-F-type (TIGR02746), RVT-GII, HNHc (smart00507)