myRT

myRT report for GCA_001913785.1_ASM191378v1

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Seq: MSEE01000001.1 Vibrio parahaemolyticus strain GIMxtf381-2013.06 NODE_1_length_709763_cov_53.6464_ID_7338, whole genome shotgun sequence (709763 bp)
Overview 1 RT 1: 608474-614878 bp Neighborhood of RT #1 [608474, 614886] RVT-UG5 nitrilase HTH_XRE Feature: gene Location: 608474-608953 bp Feature: gene Location: 608953-610068 bp Feature: gene Location: 610717-613656 bp Ori: OKY49235.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 611212-611701 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 61 1 21 2-61 1 701 bp Feature: domain Description: nitrilase Location: 612997-613582 bp Feature: domain Description: nitrilase Location: 61 2997-61 3582 bp Feature: gene Location: 613689-614165 bp Feature: gene Location: 614677-614886 bp Ori: OKY49123.1 Feature: domain Description: HTH_XRE Location: 614713-614878 bp Feature: domain Description: HTH_XRE Location: 61 471 3-61 4878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), HTH_XRE (smart00530)

Seq: MSEE01000025.1 Vibrio parahaemolyticus strain GIMxtf381-2013.06 NODE_25_length_9644_cov_30.4086_ID_2632, whole genome shotgun sequence (9644 bp)
Overview 1 RT 1: 1695-5507 bp Neighborhood of RT #1 [1695, 5509] DUF2846 RVT-UG15 DUF3265 Feature: gene Location: 1695-2207 bp Feature: gene Location: 2436-2900 bp Ori: OKY36793.1 Feature: domain Description: DUF2846 Location: 2556-2814 bp Feature: domain Description: DUF2 846 Location: 2 556-2 814 bp Feature: gene Location: 3082-4680 bp Ori: OKY36794.1 Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 3502-3919 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 3502 -3919 bp Feature: gene Location: 5134-5340 bp Feature: gene Location: 5420-5509 bp Ori: OKY36805.1 Feature: domain Description: DUF3265 Location: 5426-5507 bp Feature: domain Description: DUF32 65 Location: 542 6-5507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2846 (pfam11008), RVT-UG15, DUF3265 (pfam11665)