myRT

myRT report for GCA_001914235.1_ASM191423v1

Download annotations/find similar RTs

Seq: MQUF01000017.1 Desulfobulbaceae bacterium DB1 DB1_contig_17, whole genome shotgun sequence (32490 bp)
Overview 1 RT 1: 24603-27817 bp Neighborhood of RT #1 [24603, 27873] ParE DUF1566 RVT-DGRs MutS_I DUF1566 Avd_like Feature: gene Location: 24603-24899 bp Ori: OKY74306.1 Feature: domain Description: ParE Location: 24606-24894 bp Feature: domain Description: ParE Location: 24606-24894 bp Feature: gene Location: 24987-25544 bp Ori: OKY74307.1 Feature: domain Description: DUF1566 Location: 25116-25533 bp Feature: domain Description: DUF1 566 Location: 251 1 6-25533 bp Feature: gene Location: 25705-27291 bp Ori: OKY74308.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25963-26647 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25963-26647 bp Feature: domain Description: MutS_I Location: 26968-27238 bp Feature: domain Description: MutS_I Location: 26968-27238 bp Feature: gene Location: 27236-27361 bp Feature: domain Description: DUF1566 Location: 27242-27362 bp Feature: domain Description: DUF1 566 Location: 27242-27362 bp Feature: gene Location: 27481-27873 bp Ori: OKY74309.1 Feature: domain Description: Avd_like Location: 27508-27817 bp Feature: domain Description: Avd_like Location: 27508-2781 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParE (COG3668), DUF1566 (pfam07603), RVT-DGRs, MutS_I (pfam01624), Avd_like (cd16376)

Seq: MQUF01000002.1 Desulfobulbaceae bacterium DB1 DB1_contig_2, whole genome shotgun sequence (314101 bp)
Overview 1 RT 1: 1-4127 bp Neighborhood of RT #1 [1, 4150] EamA EamA RVT-GII GIIM PemK_toxin Feature: gene Location: 1-475 bp Feature: gene Location: 638-1495 bp Ori: OKY76904.1 Feature: domain Description: EamA Location: 650-1046 bp Feature: domain Description: EamA Location: 650-1046 bp Feature: domain Description: EamA Location: 1097-1487 bp Feature: domain Description: EamA Location: 1097-1487 bp Feature: gene Location: 1573-2895 bp Ori: OKY76638.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1831-2449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1831-2 449 bp Feature: domain Description: GIIM Note: maturase Location: 2491-2689 bp Feature: domain Description: GIIM Note: maturase Location: 2 491-2 689 bp Feature: gene Location: 3459-3668 bp Feature: gene Location: 3821-4150 bp Ori: OKY76639.1 Feature: domain Description: PemK_toxin Location: 3884-4127 bp Feature: domain Description: PemK_toxin Location: 3884-412 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EamA (pfam00892), RVT-GII, GIIM (pfam08388), PemK_toxin (pfam02452)

Seq: MQUF01000011.1 Desulfobulbaceae bacterium DB1 DB1_contig_11, whole genome shotgun sequence (144800 bp)
Overview 1 RT 1: 19455-22179 bp Neighborhood of RT #1 [19455, 22229] PhdYeFM_antitox PIN_VapC4-5_FitB-like RVT-UG11 Phage_int_SAM_4 INT_IntI_C Feature: gene Location: 19455-19709 bp Ori: OKY74907.1 Feature: domain Description: PhdYeFM_antitox Location: 19467-19641 bp Feature: domain Description: PhdYeFM_antitox Location: 19467-19641 bp Feature: gene Location: 19709-20131 bp Ori: OKY74908.1 Feature: domain Description: PIN_VapC4-5_FitB-like Location: 19718-20120 bp Feature: domain Description: PIN_VapC4-5_FitB-like Location: 19718-20120 bp Feature: gene Location: 20619-21119 bp Ori: OKY74909.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 20622-20937 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 20622-2093 7 bp Feature: gene Location: 21198-21317 bp Feature: gene Location: 21468-22229 bp Ori: OKY74910.1 Feature: domain Description: Phage_int_SAM_4 Location: 21513-21753 bp Feature: domain Description: Phage_int_SAM_4 Location: 21513 -21753 bp Feature: domain Description: INT_IntI_C Location: 21786-22179 bp Feature: domain Description: INT_IntI_C Location: 21786-22179 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PhdYeFM_antitox (pfam02604), PIN_VapC4-5_FitB-like (cd18754), RVT-UG11, Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193)

Seq: MQUF01000015.1 Desulfobulbaceae bacterium DB1 DB1_contig_15, whole genome shotgun sequence (98279 bp)
Overview 1 RT 1: 84190-89911 bp Neighborhood of RT #1 [84190, 90204] Cas2_I_II_III Cas1_I-II-III RVT-CRISPR RVT-CRISPR cas_cyan_RAMP_2 cas_cyan_RAMP_2 Feature: gene Location: 84190-84465 bp Ori: OKY74491.1 Feature: domain Description: Cas2_I_II_III Location: 84199-84430 bp Feature: domain Description: Cas2_I_II_III Location: 84 199-84 4 30 bp Feature: gene Location: 84468-85469 bp Ori: OKY74492.1 Feature: domain Description: Cas1_I-II-III Location: 84477-85431 bp Feature: domain Description: Cas1_I-II-III Location: 84 4 77-854 31 bp Feature: gene Location: 87269-87859 bp Ori: OKY74493.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 87275-87695 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 87275-87695 bp Feature: gene Location: 87831-88235 bp Ori: OKY74494.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 88035-88221 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 88035-88221 bp Feature: gene Location: 88222-89286 bp Feature: gene Location: 89320-90204 bp Ori: OKY74496.1 Feature: domain Description: cas_cyan_RAMP_2 Location: 89344-89569 bp Feature: domain Description: cas_cyan_RAMP_2 Location: 8934 4 -89569 bp Feature: domain Description: cas_cyan_RAMP_2 Location: 89695-89911 bp Feature: domain Description: cas_cyan_RAMP_2 Location: 89695-89911 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), Cas1_I-II-III (cl00656), RVT-CRISPR, cas_cyan_RAMP_2 (TIGR02674)