myRT

myRT report for GCA_001914715.1_ASM191471v1

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Seq: MNDA01000601.1 Ktedonobacter sp. 13_2_20CM_53_11 13_2_20cm_scaffold_91912, whole genome shotgun sequence (1063 bp)
Overview 1 RT 1: 1-880 bp Neighborhood of RT #1 [1, 955] RVT-GII GIIM Feature: gene Location: 1-955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-595 bp Feature: domain Description: GIIM Note: maturase Location: 646-880 bp Feature: domain Description: GIIM Note: maturase Location: 646-880 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MNDA01000065.1 Ktedonobacter sp. 13_2_20CM_53_11 13_2_20cm_scaffold_19752, whole genome shotgun sequence (2972 bp)
Overview 1 RT 1: 8-2673 bp Neighborhood of RT #1 [8, 2753] RVT_N RVT-GII YkfC HNHc RVT_N Feature: gene Location: 8-1804 bp Feature: RT Description: RVT_N Location: 41-281 bp Feature: RT Description: RVT_N Location: 41-2 81 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 329-1001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32 9-1001 bp Feature: domain Description: YkfC Location: 1238-1355 bp Feature: domain Description: YkfC Location: 12 38-1355 bp Feature: domain Description: HNHc Note: nucleases Location: 1523-1682 bp Feature: domain Description: HNHc Note: nucleases Location: 152 3-1682 bp Feature: gene Location: 2379-2753 bp Feature: RT Description: RVT_N Location: 2427-2673 bp Feature: RT Description: RVT_N Location: 2 42 7-2 673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507)

Seq: MNDA01000271.1 Ktedonobacter sp. 13_2_20CM_53_11 13_2_20cm_scaffold_23192, whole genome shotgun sequence (2163 bp)
Overview 1 RT 1: 414-2073 bp Neighborhood of RT #1 [414, 2163] RVT_N RVT-GII GIIM HNH Feature: gene Location: 414-2163 bp Feature: RT Description: RVT_N Location: 447-693 bp Feature: RT Description: RVT_N Location: 447-693 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 735-1398 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 5-13 98 bp Feature: domain Description: GIIM Note: maturase Location: 1497-1731 bp Feature: domain Description: GIIM Note: maturase Location: 1497-173 1 bp Feature: domain Description: HNH Note: nucleases Location: 1938-2073 bp Feature: domain Description: HNH Note: nucleases Location: 193 8-2073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: MNDA01000182.1 Ktedonobacter sp. 13_2_20CM_53_11 13_2_20cm_scaffold_603, whole genome shotgun sequence (13318 bp)
Overview 1 RT 1: 11112-12884 bp Neighborhood of RT #1 [11112, 13312] HTH_32 rve RVT-GII Feature: gene Location: 11112-12131 bp Feature: domain Description: HTH_32 Location: 11352-11517 bp Feature: domain Description: HTH_32 Location: 11352-11517 bp Feature: domain Description: rve Location: 11577-11916 bp Feature: domain Description: rve Location: 11577-11916 bp Feature: gene Location: 12204-12434 bp Feature: gene Location: 12635-13312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12638-12884 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12638-12884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_32 (pfam13565), rve (pfam00665), RVT-GII

Seq: MNDA01000403.1 Ktedonobacter sp. 13_2_20CM_53_11 13_2_20cm_scaffold_29949, whole genome shotgun sequence (2526 bp)
Overview 1 RT 1: 166-1204 bp Neighborhood of RT #1 [166, 2056] RVT-GII Feature: gene Location: 166-2056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 442-1204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII