myRT

myRT report for GCA_001915365.1_ASM191536v1

Download annotations/find similar RTs

Seq: MNQJ01000102.1 Bacteroidales bacterium 43_8 Ley3_66761_scaffold_11751, whole genome shotgun sequence (5869 bp)
Overview 1 RT 1: 715-5869 bp Neighborhood of RT #1 [715, 5869] HTH_17 COG5545 COG5545 RVT-GII Intron_maturas2 Feature: gene Location: 715-990 bp Feature: domain Description: HTH_17 Location: 844-973 bp Feature: domain Description: HTH_1 7 Location: 844-973 bp Feature: gene Location: 1460-2550 bp Feature: domain Description: COG5545 Location: 1619-2057 bp Feature: domain Description: COG5545 Location: 1 61 9-2057 bp Feature: domain Description: COG5545 Location: 2174-2408 bp Feature: domain Description: COG5545 Location: 21 74-2408 bp Feature: gene Location: 3642-5450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3906-4728 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3906-4728 bp Feature: domain Description: Intron_maturas2 Location: 4797-5106 bp Feature: domain Description: Intron_maturas2 Location: 4797-51 06 bp Feature: gene Location: 5560-5869 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5545 (Predicted P-loop ATPase and inactivated derivatives ), RVT-GII, Intron_maturas2 (pfam01348), HTH_17 (pfam12728)

Seq: MNQJ01000219.1 Bacteroidales bacterium 43_8 Ley3_66761_scaffold_8822, whole genome shotgun sequence (5016 bp)
Overview 1 RT 1: 1-5016 bp Neighborhood of RT #1 [1, 5016] Reg_prop Reg_prop Y_Y_Y RVT_N RVT-GII GIIM COG3292 Reg_prop COG3292 Feature: gene Location: 1-1030 bp Feature: domain Description: Reg_prop Location: 376-436 bp Feature: domain Description: Reg_prop Location: 376-436 bp Feature: domain Description: Reg_prop Location: 604-676 bp Feature: domain Description: Reg_prop Location: 604-676 bp Feature: domain Description: Y_Y_Y Location: 880-1021 bp Feature: domain Description: Y_Y_Y Location: 880-102 1 bp Feature: gene Location: 1035-2687 bp Feature: RT Description: RVT_N Location: 1089-1332 bp Feature: RT Description: RVT_N Location: 1089-1332 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377-2025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377-2 02 5 bp Feature: domain Description: GIIM Note: maturase Location: 2079-2310 bp Feature: domain Description: GIIM Note: maturase Location: 2 079-2 310 bp Feature: gene Location: 3327-4568 bp Feature: domain Description: COG3292 Location: 3363-3579 bp Feature: domain Description: COG32 92 Location: 3363-3579 bp Feature: domain Description: Reg_prop Location: 3789-3840 bp Feature: domain Description: Reg_prop Location: 3789-3840 bp Feature: domain Description: COG3292 Location: 3930-4506 bp Feature: domain Description: COG32 92 Location: 3930-4506 bp Feature: gene Location: 4823-5016 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), Reg_prop (pfam07494), Y_Y_Y (pfam07495)