myRT

myRT report for GCA_001915455.1_ASM191545v1

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Seq: MNQN01000127.1 Bacteroides sp. 43_46 Ley3_66761_scaffold_662, whole genome shotgun sequence (138311 bp)
Overview 1 RT 1: 38668-42927 bp Neighborhood of RT #1 [38668, 43235] DUF1566 Avd_like RVT-DGRs Reg_prop Reg_prop Reg_prop Reg_prop Reg_prop Feature: gene Location: 38668-39480 bp Ori: OKZ15066.1 Feature: domain Description: DUF1566 Location: 39202-39454 bp Feature: domain Description: DUF1 566 Location: 39202-39454 bp Feature: gene Location: 39626-40006 bp Ori: OKZ15067.1 Feature: domain Description: Avd_like Location: 39653-39959 bp Feature: domain Description: Avd_like Location: 39653-39959 bp Feature: gene Location: 40021-41442 bp Ori: OKZ15068.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40393-41098 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 40393-41 098 bp Feature: gene Location: 41408-41683 bp Feature: gene Location: 41820-43235 bp Feature: domain Description: Reg_prop Location: 41928-41994 bp Feature: domain Description: Reg_prop Location: 41 928-41 994 bp Feature: domain Description: Reg_prop Location: 42063-42129 bp Feature: domain Description: Reg_prop Location: 42063-421 29 bp Feature: domain Description: Reg_prop Location: 42576-42642 bp Feature: domain Description: Reg_prop Location: 42576-42642 bp Feature: domain Description: Reg_prop Location: 42717-42780 bp Feature: domain Description: Reg_prop Location: 4271 7-42780 bp Feature: domain Description: Reg_prop Location: 42858-42927 bp Feature: domain Description: Reg_prop Location: 42858-42927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, Reg_prop (pfam07494)

Seq: MNQN01000017.1 Bacteroides sp. 43_46 Ley3_66761_scaffold_569, whole genome shotgun sequence (214423 bp)
Overview 1 RT 1: 84953-98848 bp Neighborhood of RT #1 [84953, 98850] DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons GlnA3 Feature: gene Location: 84953-86720 bp Feature: gene Location: 86817-92783 bp Ori: OKZ23087.1 Feature: domain Description: DUF4011 Location: 88047-88560 bp Feature: domain Description: DUF4011 Location: 88047-88560 bp Feature: domain Description: DEXXQc_SF1 Location: 88899-89514 bp Feature: domain Description: DEXXQc_SF1 Location: 88899-89514 bp Feature: domain Description: DEXXQc_SF1 Location: 90144-91086 bp Feature: domain Description: DEXXQc_SF1 Location: 90144-91086 bp Feature: domain Description: TIGR00376 Location: 91218-91608 bp Feature: domain Description: TIGR00376 Location: 912 18-91608 bp Feature: domain Description: MTES_1575 Location: 91758-92043 bp Feature: domain Description: MTES_1575 Location: 91758-92 043 bp Feature: domain Description: DUF3320 Location: 92292-92433 bp Feature: domain Description: DUF332 0 Location: 92 2 92 -92 433 bp Feature: gene Location: 92780-93910 bp Ori: OKZ23088.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93101-93653 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 93101-93653 bp Feature: gene Location: 94113-96320 bp Feature: gene Location: 96661-98850 bp Ori: OKZ23090.1 Feature: domain Description: GlnA3 Location: 96733-98848 bp Feature: domain Description: GlnA3 Location: 96733-98848 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), RVT-Retrons, GlnA3 (COG3968)

Seq: MNQN01000135.1 Bacteroides sp. 43_46 Ley3_66761_scaffold_2192, whole genome shotgun sequence (21578 bp)
Overview 1 RT 1: 1795-5609 bp Neighborhood of RT #1 [1795, 5755] RVT-GII GIIM RVT-GII KOG1378 Feature: gene Location: 1795-2001 bp Feature: gene Location: 2137-2394 bp Feature: gene Location: 2494-3183 bp Ori: OKZ14604.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2515-2914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2515-2914 bp Feature: domain Description: GIIM Note: maturase Location: 2929-3160 bp Feature: domain Description: GIIM Note: maturase Location: 2929-3 160 bp Feature: gene Location: 3186-3674 bp Ori: OKZ14605.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3522-3660 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 522-3 660 bp Feature: gene Location: 3964-4221 bp Feature: gene Location: 4559-5755 bp Ori: OKZ14607.1 Feature: domain Description: KOG1378 Location: 4697-5609 bp Feature: domain Description: KOG13 78 Location: 4697-5609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), KOG1378 (KOG1378, Purple acid phosphatase )