myRT

myRT report for GCA_001915765.1_ASM191576v1

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Seq: MNRD01000127.1 Clostridiales bacterium 41_12_two_minus Ley3_66761_scaffold_1402, whole genome shotgun sequence (53330 bp)
Overview 1 RT 1: 22074-26144 bp Neighborhood of RT #1 [22074, 26434] RVT-DGRs pfam12571 Feature: gene Location: 22074-22337 bp Feature: gene Location: 22731-22994 bp Feature: gene Location: 22954-24069 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 23161-23779 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 231 61 -23779 bp Feature: gene Location: 24518-25810 bp Feature: gene Location: 25826-26434 bp Feature: domain Description: pfam12571 Location: 25850-26144 bp Feature: domain Description: pfam1 2571 Location: 25850-261 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, pfam12571 (DUF3751;Phage tail-collar fibre protein)

Seq: MNRD01000108.1 Clostridiales bacterium 41_12_two_minus Ley3_66761_scaffold_3269, whole genome shotgun sequence (13522 bp)
Overview 1 RT 1: 809-5093 bp Neighborhood of RT #1 [809, 5122] AAAA RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Feature: gene Location: 809-1132 bp Feature: gene Location: 1290-2705 bp Feature: domain Description: AAAA Location: 1293-2520 bp Feature: domain Description: AAAA Location: 12 93-2 52 0 bp Feature: gene Location: 2844-3701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2907-3054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 907-3054 bp Feature: domain Description: GIIM Note: maturase Location: 3108-3339 bp Feature: domain Description: GIIM Note: maturase Location: 3108-3339 bp Feature: gene Location: 3769-4811 bp Feature: domain Description: Phage_int_SAM_1 Location: 3823-4069 bp Feature: domain Description: Phage_int_SAM_1 Location: 382 3-4069 bp Feature: domain Description: INT_RitC_C_like Location: 4162-4702 bp Feature: domain Description: INT_RitC_C_like Location: 4162 -4702 bp Feature: gene Location: 4808-5122 bp Feature: domain Description: INT_RitB_C_like Location: 4823-5093 bp Feature: domain Description: INT_RitB_C_like Location: 482 3-5093 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAAA (COG1672), RVT-GII, GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), INT_RitB_C_like (cd00797)

Seq: MNRD01000178.1 Clostridiales bacterium 41_12_two_minus Ley3_66761_scaffold_11358, whole genome shotgun sequence (3359 bp)
Overview 1 RT 1: 846-3359 bp Neighborhood of RT #1 [846, 3359] RVT-GII HNHc Feature: gene Location: 846-2729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1182-1899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1182-1899 bp Feature: domain Description: HNHc Note: nucleases Location: 2481-2619 bp Feature: domain Description: HNHc Note: nucleases Location: 2481-2619 bp Feature: gene Location: 2891-3174 bp Feature: gene Location: 3171-3359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: MNRD01000079.1 Clostridiales bacterium 41_12_two_minus Ley3_66761_scaffold_24744, whole genome shotgun sequence (2063 bp)
Overview 1 RT 1: 376-2063 bp Neighborhood of RT #1 [376, 2063] RVT-GII GIIM Feature: gene Location: 376-1701 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625-1243 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 625-124 3 bp Feature: domain Description: GIIM Note: maturase Location: 1300-1537 bp Feature: domain Description: GIIM Note: maturase Location: 1300-1537 bp Feature: gene Location: 1775-2063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MNRD01000249.1 Clostridiales bacterium 41_12_two_minus Ley3_66761_scaffold_1615, whole genome shotgun sequence (63477 bp)
Overview 1 RT 1: 26851-31765 bp Neighborhood of RT #1 [26851, 31878] pfam12571 RVT-DGRs ABC_trans_CmpB Feature: gene Location: 26851-27231 bp Feature: domain Description: pfam12571 Location: 26863-27187 bp Feature: domain Description: pfam125 71 Location: 26863-27187 bp Feature: gene Location: 27300-28985 bp Feature: gene Location: 29381-30736 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29690-30395 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 29690-30395 bp Feature: gene Location: 30729-31406 bp Feature: gene Location: 31408-31878 bp Feature: domain Description: ABC_trans_CmpB Location: 31450-31765 bp Feature: domain Description: ABC_trans_CmpB Location: 3145 0-31765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam12571 (DUF3751;Phage tail-collar fibre protein), RVT-DGRs, ABC_trans_CmpB (pfam06541)

Seq: MNRD01000186.1 Clostridiales bacterium 41_12_two_minus Ley3_66761_scaffold_11814, whole genome shotgun sequence (3876 bp)
Overview 1 RT 1: 1-3854 bp Neighborhood of RT #1 [1, 3854] RVT-GII Intron_maturas2 Feature: gene Location: 1-1012 bp Feature: gene Location: 1085-1267 bp Feature: gene Location: 1746-3536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2013-2826 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2013-2826 bp Feature: domain Description: Intron_maturas2 Location: 2910-3207 bp Feature: domain Description: Intron_maturas2 Location: 2910-3207 bp Feature: gene Location: 3645-3854 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)