myRT

myRT report for GCA_001915915.1_ASM191591v1

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Seq: MNRK01000133.1 Clostridiales bacterium Nov_37_41 Ley3_66761_scaffold_8279, whole genome shotgun sequence (4248 bp)
Overview 1 RT 1: 679-3979 bp Neighborhood of RT #1 [679, 4149] HTH_ARAC AraC_E_bind AmpC RVT-GII GIIM Feature: gene Location: 679-1542 bp Feature: domain Description: HTH_ARAC Location: 745-985 bp Feature: domain Description: HTH_ARAC Location: 745-985 bp Feature: domain Description: AraC_E_bind Location: 1069-1528 bp Feature: domain Description: AraC_E_bind Location: 1 069-1 528 bp Feature: gene Location: 1726-2712 bp Feature: domain Description: AmpC Location: 1816-2638 bp Feature: domain Description: AmpC Location: 1 81 6-2638 bp Feature: gene Location: 2893-4149 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3076-3691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3076-3691 bp Feature: domain Description: GIIM Note: maturase Location: 3751-3979 bp Feature: domain Description: GIIM Note: maturase Location: 3751 -3979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AmpC (COG1680), RVT-GII, GIIM (pfam08388), HTH_ARAC (smart00342), AraC_E_bind (smart00871)

Seq: MNRK01000283.1 Clostridiales bacterium Nov_37_41 Ley3_66761_scaffold_2806, whole genome shotgun sequence (30183 bp)
Overview 1 RT 1: 10129-15680 bp Neighborhood of RT #1 [10129, 15682] HTH_XRE RVT-Retrons guaA Feature: gene Location: 10129-10329 bp Feature: gene Location: 10559-11044 bp Feature: domain Description: HTH_XRE Location: 10589-10754 bp Feature: domain Description: HTH_XRE Location: 10589-10754 bp Feature: gene Location: 11118-13124 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12267-12780 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 2 67-12 780 bp Feature: gene Location: 13291-14001 bp Feature: gene Location: 14162-15682 bp Feature: domain Description: guaA Location: 14171-15680 bp Feature: domain Description: guaA Location: 14171-15680 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, guaA (PRK00074)