myRT

myRT report for GCA_001916005.1_ASM191600v1

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Seq: MNRP01000017.1 Clostridium sp. 26_22 Ley3_66761_scaffold_5650, whole genome shotgun sequence (6817 bp)
Overview 1 RT 1: 1-4558 bp Neighborhood of RT #1 [1, 4558] Peptidase_M56 Penicillinase_R RVT-GII GIIM SH3_3 SH3_3 Feature: gene Location: 1-684 bp Feature: domain Description: Peptidase_M56 Location: 46-670 bp Feature: domain Description: Peptidase_M56 Location: 46-670 bp Feature: gene Location: 702-1079 bp Feature: domain Description: Penicillinase_R Location: 723-1068 bp Feature: domain Description: Penicillinase_R Location: 723-1 068 bp Feature: gene Location: 1263-2240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1296-1785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 296-1 785 bp Feature: domain Description: GIIM Note: maturase Location: 1839-2055 bp Feature: domain Description: GIIM Note: maturase Location: 1 839-2055 bp Feature: gene Location: 2334-3359 bp Feature: domain Description: SH3_3 Location: 2478-2637 bp Feature: domain Description: SH3_3 Location: 2478-2637 bp Feature: domain Description: SH3_3 Location: 2937-3090 bp Feature: domain Description: SH3_3 Location: 2937-3090 bp Feature: gene Location: 3539-4558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Peptidase_M56 (pfam05569), SH3_3 (pfam08239), Penicillinase_R (pfam03965)

Seq: MNRP01000041.1 Clostridium sp. 26_22 Ley3_66761_scaffold_930, whole genome shotgun sequence (44844 bp)
Overview 1 RT 1: 516-4847 bp Neighborhood of RT #1 [516, 5236] RVT-DGRs RVT-DGRs DUF3751 DUF2313 Feature: gene Location: 516-767 bp Feature: gene Location: 911-1243 bp Feature: gene Location: 1212-1640 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1215-1395 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 12 15-1395 bp Feature: gene Location: 1606-2268 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1822-2173 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 182 2 -2 173 bp Feature: gene Location: 2641-4446 bp Feature: domain Description: DUF3751 Location: 2662-3094 bp Feature: domain Description: DUF3751 Location: 2 662 -3094 bp Feature: gene Location: 4448-5236 bp Feature: domain Description: DUF2313 Location: 4457-4847 bp Feature: domain Description: DUF2 313 Location: 4457-4847 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF3751 (pfam12571), DUF2313 (pfam10076)

Seq: MNRP01000010.1 Clostridium sp. 26_22 Ley3_66761_scaffold_3205, whole genome shotgun sequence (13883 bp)
Overview 1 RT 1: 1-2948 bp Neighborhood of RT #1 [1, 3097] Avd_like RVT-DGRs MutS_I Feature: gene Location: 1-523 bp Feature: gene Location: 676-1047 bp Feature: domain Description: Avd_like Location: 709-1018 bp Feature: domain Description: Avd_like Location: 709-1018 bp Feature: gene Location: 1019-2164 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1229-1847 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1229-1847 bp Feature: gene Location: 2437-2697 bp Feature: gene Location: 2702-3097 bp Feature: domain Description: MutS_I Location: 2720-2948 bp Feature: domain Description: MutS_I Location: 2720-2948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, MutS_I (pfam01624), Avd_like (cd16376)