myRT

myRT report for GCA_001916035.1_ASM191603v1

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Seq: MNRQ01000030.1 Clostridium sp. 27_14 Ley3_66761_scaffold_3275, whole genome shotgun sequence (39114 bp)
Overview 1 RT 1: 23739-27602 bp Neighborhood of RT #1 [23739, 27649] Avd_like dnaE RVT-DGRs PRK00118 PRK10867 Feature: gene Location: 23739-24152 bp Feature: domain Description: Avd_like Location: 23796-24102 bp Feature: domain Description: Avd_like Location: 23796-241 02 bp Feature: gene Location: 24118-24402 bp Feature: domain Description: dnaE Location: 24124-24391 bp Feature: domain Description: dnaE Location: 241 24-24391 bp Feature: gene Location: 24374-25411 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24584-25193 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 24584-251 93 bp Feature: gene Location: 25854-26237 bp Feature: domain Description: PRK00118 Location: 25896-26178 bp Feature: domain Description: PRK001 1 8 Location: 25896-261 78 bp Feature: gene Location: 26297-27649 bp Feature: domain Description: PRK10867 Location: 26306-27602 bp Feature: domain Description: PRK1 0867 Location: 26306-27602 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), dnaE (PRK07374), RVT-DGRs, PRK00118 (putative DNA-binding protein; Validated), PRK10867 (signal recognition particle protein; Provisional)

Seq: MNRQ01000038.1 Clostridium sp. 27_14 Ley3_66761_scaffold_4163, whole genome shotgun sequence (26662 bp)
Overview 1 RT 1: 429-4466 bp Neighborhood of RT #1 [429, 4618] PulG RVT-DGRs Avd_like MutS_I Feature: gene Location: 429-2147 bp Feature: domain Description: PulG Location: 450-597 bp Feature: domain Description: PulG Location: 450-597 bp Feature: gene Location: 2752-3855 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2962-3580 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 962 -3580 bp Feature: gene Location: 3840-4193 bp Feature: domain Description: Avd_like Location: 3864-4179 bp Feature: domain Description: Avd_like Location: 3864-4179 bp Feature: gene Location: 4196-4618 bp Feature: domain Description: MutS_I Location: 4220-4466 bp Feature: domain Description: MutS_I Location: 42 2 0-4466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), MutS_I (pfam01624), PulG (pfam11773)

Seq: MNRQ01000007.1 Clostridium sp. 27_14 Ley3_66761_scaffold_2112, whole genome shotgun sequence (43209 bp)
Overview 1 RT 1: 605-4900 bp Neighborhood of RT #1 [605, 4900] Avd_like RVT-DGRs TsaE Feature: gene Location: 605-907 bp Feature: gene Location: 888-1244 bp Feature: domain Description: Avd_like Location: 924-1221 bp Feature: domain Description: Avd_like Location: 924-1221 bp Feature: gene Location: 1750-2730 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1960-2548 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1960-2548 bp Feature: gene Location: 2705-3163 bp Feature: domain Description: TsaE Location: 2732-3146 bp Feature: domain Description: TsaE Location: 273 2-3 146 bp Feature: gene Location: 3179-4900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, TsaE (pfam02367), Avd_like (cd16376)

Seq: MNRQ01000019.1 Clostridium sp. 27_14 Ley3_66761_scaffold_906, whole genome shotgun sequence (56254 bp)
Overview 1 RT 1: 5509-14756 bp Neighborhood of RT #1 [5509, 14761] PRK09414 GyrB RVT-GII HNHc parE_Gpos PRK13979 Feature: gene Location: 5509-6861 bp Feature: domain Description: PRK09414 Location: 5530-6859 bp Feature: domain Description: PRK094 14 Location: 5530-6859 bp Feature: gene Location: 7117-8679 bp Feature: domain Description: GyrB Location: 7132-8680 bp Feature: domain Description: GyrB Location: 7132-8680 bp Feature: gene Location: 9465-11375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9789-10527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9789-10527 bp Feature: domain Description: HNHc Note: nucleases Location: 11115-11244 bp Feature: domain Description: HNHc Note: nucleases Location: 11115-1124 4 bp Feature: gene Location: 11477-11842 bp Feature: domain Description: parE_Gpos Location: 11480-11834 bp Feature: domain Description: parE_Gpos Location: 114 80-11834 bp Feature: gene Location: 11867-14761 bp Feature: domain Description: PRK13979 Location: 11876-14756 bp Feature: domain Description: PRK13979 Location: 11876-14 756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT parE_Gpos (TIGR01058), PRK09414 (NADP-specific glutamate dehydrogenase), GyrB (COG0187), RVT-GII, HNHc (smart00507)