myRT

myRT report for GCA_001916315.1_ASM191631v1

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Seq: MNSF01000064.1 Coprococcus sp. CAG:131-related_45_246 Ley3_66761_scaffold_2936, whole genome shotgun sequence (20655 bp)
Overview 1 RT 1: 11047-14855 bp Neighborhood of RT #1 [11047, 14911] PHA00653 PHA00653 Avd_like RVT-DGRs Amidase_2 Feature: gene Location: 11047-12243 bp Feature: domain Description: PHA00653 Location: 11161-11989 bp Feature: domain Description: PHA00653 Location: 1 1 1 61 -1 1 989 bp Feature: domain Description: PHA00653 Location: 12076-12241 bp Feature: domain Description: PHA00653 Location: 1 2076-1 2241 bp Feature: gene Location: 12311-12652 bp Feature: domain Description: Avd_like Location: 12329-12632 bp Feature: domain Description: Avd_like Location: 1 2329-1 2632 bp Feature: gene Location: 12964-13845 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 13174-13780 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 31 74-1 3780 bp Feature: gene Location: 14031-14324 bp Feature: gene Location: 14387-14911 bp Feature: domain Description: Amidase_2 Location: 14453-14855 bp Feature: domain Description: Amidase_2 Location: 1 4453-1 4855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00653 (mtd;major tropism determinant), Avd_like (cd16376), RVT-DGRs, Amidase_2 (pfam01510)

Seq: MNSF01000070.1 Coprococcus sp. CAG:131-related_45_246 Ley3_66761_scaffold_98, whole genome shotgun sequence (211606 bp)
Overview 1 RT 1: 166287-171722 bp Neighborhood of RT #1 [166287, 171970] ParAB_family HEPN_RiboL-PSP RVT-Retrons Mrr_cat Feature: gene Location: 166287-167327 bp Feature: domain Description: ParAB_family Location: 166293-167004 bp Feature: domain Description: ParAB_family Location: 1662 93-167004 bp Feature: gene Location: 167320-167928 bp Feature: domain Description: HEPN_RiboL-PSP Location: 167359-167911 bp Feature: domain Description: HEPN_RiboL-PSP Location: 167359-167911 bp Feature: gene Location: 168539-170170 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 168662-169262 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 168662 -1692 62 bp Feature: gene Location: 170422-171480 bp Feature: gene Location: 171512-171970 bp Feature: domain Description: Mrr_cat Location: 171539-171722 bp Feature: domain Description: Mrr_cat Location: 171539-17172 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ParAB_family (cd02042), HEPN_RiboL-PSP (pfam18735), RVT-Retrons, Mrr_cat (pfam04471)