myRT

myRT report for GCA_001916615.1_ASM191661v1

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Seq: MNST01000040.1 Firmicutes bacterium CAG_194_44_15 Ley3_66761_scaffold_6024, whole genome shotgun sequence (6317 bp)
Overview 1 RT 1: 840-6193 bp Neighborhood of RT #1 [840, 6222] RVT-GII HNHc TraG-D_C PRK13857 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 840-2717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1155-1887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 55-1 887 bp Feature: domain Description: HNHc Note: nucleases Location: 2466-2595 bp Feature: domain Description: HNHc Note: nucleases Location: 2466-2595 bp Feature: gene Location: 2896-3435 bp Feature: domain Description: TraG-D_C Location: 2899-3181 bp Feature: domain Description: TraG-D_C Location: 2899-31 81 bp Feature: gene Location: 3451-3804 bp Feature: domain Description: PRK13857 Location: 3544-3778 bp Feature: domain Description: PRK1 3857 Location: 3544-3778 bp Feature: gene Location: 4381-6222 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4651-5491 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4651 -5491 bp Feature: domain Description: Intron_maturas2 Location: 5563-5872 bp Feature: domain Description: Intron_maturas2 Location: 5563-5872 bp Feature: domain Description: HNHc Note: nucleases Location: 6043-6193 bp Feature: domain Description: HNHc Note: nucleases Location: 6043-61 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), PRK13857 (pilin major subunit VirB2), RVT-GII, HNHc (smart00507), Intron_maturas2 (pfam01348)

Seq: MNST01000024.1 Firmicutes bacterium CAG_194_44_15 Ley3_66761_scaffold_2537, whole genome shotgun sequence (31274 bp)
Overview 1 RT 1: 6049-9658 bp Neighborhood of RT #1 [6049, 9660] RVT-DGRs Avd_like PHA00653 PHA00653 Feature: gene Location: 6049-6288 bp Feature: gene Location: 6344-6658 bp Feature: gene Location: 6733-7785 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6943-7558 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6943-7558 bp Feature: gene Location: 8119-8517 bp Feature: domain Description: Avd_like Location: 8185-8488 bp Feature: domain Description: Avd_like Location: 8185-8488 bp Feature: gene Location: 8560-9660 bp Feature: domain Description: PHA00653 Location: 8683-9142 bp Feature: domain Description: PHA00653 Location: 8683-9142 bp Feature: domain Description: PHA00653 Location: 9178-9658 bp Feature: domain Description: PHA00653 Location: 9178-9658 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Avd_like (cd16376), PHA00653 (mtd;major tropism determinant)

Seq: MNST01000004.1 Firmicutes bacterium CAG_194_44_15 Ley3_66761_scaffold_10657, whole genome shotgun sequence (3174 bp)
Overview 1 RT 1: 1-1764 bp Neighborhood of RT #1 [1, 2977] RVT-GII Feature: gene Location: 1-310 bp Feature: gene Location: 1068-2977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1377-1764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 77-1764 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII