myRT

myRT report for GCA_001916785.1_ASM191678v1

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Seq: MNTD01000021.1 Firmicutes bacterium CAG:65_45_313 Ley3_66761_scaffold_12076, whole genome shotgun sequence (2805 bp)
Overview 1 RT 1: 629-1703 bp Neighborhood of RT #1 [629, 2539] RVT-GII Feature: gene Location: 629-2539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 959-1703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 959-1 703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MNTD01000013.1 Firmicutes bacterium CAG:65_45_313 Ley3_66761_scaffold_10605, whole genome shotgun sequence (3191 bp)
Overview 1 RT 1: 1-2072 bp Neighborhood of RT #1 [1, 2905] T4SS-DNA_transf RVT-GII Feature: gene Location: 1-297 bp Feature: domain Description: T4SS-DNA_transf Location: 139-292 bp Feature: domain Description: T4SS-DNA_transf Location: 139-2 92 bp Feature: gene Location: 998-2905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1328-2072 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 8-2 072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT T4SS-DNA_transf (pfam02534), RVT-GII

Seq: MNTD01000026.1 Firmicutes bacterium CAG:65_45_313 Ley3_66761_scaffold_13122, whole genome shotgun sequence (2582 bp)
Overview 1 RT 1: 200-1985 bp Neighborhood of RT #1 [200, 2023] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 200-2023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 464-1286 bp Feature: domain Description: Intron_maturas2 Location: 1460-1661 bp Feature: domain Description: Intron_maturas2 Location: 1460-1661 bp Feature: domain Description: HNHc Note: nucleases Location: 1814-1985 bp Feature: domain Description: HNHc Note: nucleases Location: 1814-1985 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: MNTD01000019.1 Firmicutes bacterium CAG:65_45_313 Ley3_66761_scaffold_11939, whole genome shotgun sequence (5512 bp)
Overview 1 RT 1: 204-4374 bp Neighborhood of RT #1 [204, 5093] RpoE HTH_16 RVT-GII GIIM MobC Relaxase Feature: gene Location: 204-626 bp Feature: domain Description: RpoE Location: 255-609 bp Feature: domain Description: RpoE Location: 255-609 bp Feature: gene Location: 619-831 bp Feature: domain Description: HTH_16 Location: 640-805 bp Feature: domain Description: HTH_16 Location: 64 0-805 bp Feature: gene Location: 1363-2646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1567-2182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1567-2182 bp Feature: domain Description: GIIM Note: maturase Location: 2242-2473 bp Feature: domain Description: GIIM Note: maturase Location: 224 2-24 73 bp Feature: gene Location: 3098-3496 bp Feature: domain Description: MobC Location: 3323-3374 bp Feature: domain Description: MobC Location: 3323-3374 bp Feature: gene Location: 3468-5093 bp Feature: domain Description: Relaxase Location: 3618-4374 bp Feature: domain Description: Relaxase Location: 3618-4 374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RpoE (COG3343), Relaxase (pfam03432), HTH_16 (pfam12645)