myRT

myRT report for GCA_001917125.1_ASM191712v1

Download annotations/find similar RTs

Seq: MNTU01000023.1 Azospirillum sp. 47_25 Ley3_66761_scaffold_1794, whole genome shotgun sequence (26294 bp)
Overview 1 RT 1: 2360-6092 bp Neighborhood of RT #1 [2360, 6118] Upp RVT-Retrons LbH_MAT_like Feature: gene Location: 2360-3178 bp Feature: domain Description: Upp Location: 2720-2942 bp Feature: domain Description: Upp Location: 2720-2942 bp Feature: gene Location: 3175-3486 bp Feature: gene Location: 3746-4624 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3812-4364 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 381 2-4364 bp Feature: gene Location: 4884-5444 bp Feature: gene Location: 5525-6118 bp Feature: domain Description: LbH_MAT_like Location: 5768-6092 bp Feature: domain Description: LbH_MAT_like Location: 5768-6092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Upp (COG0035), RVT-Retrons, LbH_MAT_like (cd04647)

Seq: MNTU01000006.1 Azospirillum sp. 47_25 Ley3_66761_scaffold_4762, whole genome shotgun sequence (8508 bp)
Overview 1 RT 1: 3582-8217 bp Neighborhood of RT #1 [3582, 8228] RVT-DGRs DUF1566 Avd_like Feature: gene Location: 3582-4325 bp Feature: gene Location: 4553-4819 bp Feature: gene Location: 4816-6114 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5038-5737 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5038-5737 bp Feature: gene Location: 6095-6334 bp Feature: domain Description: DUF1566 Location: 6170-6275 bp Feature: domain Description: DUF1566 Location: 6170-62 75 bp Feature: gene Location: 7884-8228 bp Feature: domain Description: Avd_like Location: 7911-8217 bp Feature: domain Description: Avd_like Location: 7911-82 17 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, DUF1566 (pfam07603), Avd_like (cd16376)