myRT

myRT report for GCA_001920165.1_ASM192016v1

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Seq: MNJG01000072.1 Acidobacteria bacterium 13_1_20CM_4_56_7 13_1_20cm_4_scaffold_15531, whole genome shotgun sequence (8563 bp)
Overview 1 RT 1: 2664-8171 bp Neighborhood of RT #1 [2664, 8248] DDE_Tnp_1_4 RVT_N RVT-GII GIIM HNHc Phage_int_SAM_1 INT_RitC_C_like Feature: gene Location: 2664-3356 bp Feature: gene Location: 3642-4514 bp Feature: domain Description: DDE_Tnp_1_4 Location: 3660-4449 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 3660-4449 bp Feature: gene Location: 4620-6239 bp Feature: RT Description: RVT_N Location: 4671-4734 bp Feature: RT Description: RVT_N Location: 4671 -4734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4866-5517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4866-551 7 bp Feature: domain Description: GIIM Note: maturase Location: 5571-5805 bp Feature: domain Description: GIIM Note: maturase Location: 5571 -5805 bp Feature: domain Description: HNHc Note: nucleases Location: 6033-6189 bp Feature: domain Description: HNHc Note: nucleases Location: 6033-61 89 bp Feature: gene Location: 6660-7193 bp Feature: gene Location: 7235-8248 bp Feature: domain Description: Phage_int_SAM_1 Location: 7286-7541 bp Feature: domain Description: Phage_int_SAM_1 Location: 7286-7541 bp Feature: domain Description: INT_RitC_C_like Location: 7622-8171 bp Feature: domain Description: INT_RitC_C_like Location: 7622-81 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_4 (pfam13701), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182)