myRT

myRT report for GCA_001922685.1_ASM192268v1

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Seq: MSDA01000010.1 Acinetobacter baumannii strain 4113 scaffold8, whole genome shotgun sequence (147559 bp)
Overview 1 RT 1: 165-4140 bp Neighborhood of RT #1 [165, 4196] RVT-Retrons PaaD PaaY Feature: gene Location: 165-1391 bp Feature: gene Location: 1597-2769 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1852-2506 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 852-2506 bp Feature: gene Location: 3130-3513 bp Feature: domain Description: PaaD Location: 3172-3505 bp Feature: domain Description: PaaD Location: 31 72-3505 bp Feature: gene Location: 3591-4196 bp Feature: domain Description: PaaY Location: 3600-4140 bp Feature: domain Description: PaaY Location: 3600-41 40 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, PaaD (TIGR02286), PaaY (TIGR02287)

Seq: MSDA01000011.1 Acinetobacter baumannii strain 4113 scaffold9, whole genome shotgun sequence (131058 bp)
Overview 1 RT 1: 100580-106406 bp Neighborhood of RT #1 [100580, 106579] CirA RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 100580-102790 bp Feature: domain Description: CirA Location: 100691-102788 bp Feature: domain Description: CirA Location: 100691-102 788 bp Feature: gene Location: 103199-103366 bp Feature: gene Location: 103441-104388 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103552-104152 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103552 -104152 bp Feature: gene Location: 104389-105933 bp Feature: domain Description: COG3950 Location: 104563-105712 bp Feature: domain Description: COG3950 Location: 104563-105712 bp Feature: gene Location: 105938-106579 bp Feature: domain Description: TIGR02646 Location: 106037-106406 bp Feature: domain Description: TIGR02 646 Location: 106037-106406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CirA (COG1629), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)