myRT

myRT report for GCA_001922755.1_ASM192275v1

Download annotations/find similar RTs

Seq: MSDD01000020.1 Acinetobacter baumannii strain 11606 NODE_17, whole genome shotgun sequence (232693 bp)
Overview 1 RT 1: 100580-106406 bp Neighborhood of RT #1 [100580, 106579] CirA RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 100580-102790 bp Feature: domain Description: CirA Location: 100691-102788 bp Feature: domain Description: CirA Location: 1 00691 -1 02788 bp Feature: gene Location: 103199-103366 bp Feature: gene Location: 103441-104388 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 103552-104152 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 03552-1 041 52 bp Feature: gene Location: 104389-105933 bp Feature: domain Description: COG3950 Location: 104563-105712 bp Feature: domain Description: COG3950 Location: 1 04563-1 0571 2 bp Feature: gene Location: 105938-106579 bp Feature: domain Description: TIGR02646 Location: 106037-106406 bp Feature: domain Description: TIGR02646 Location: 1 06037-1 06406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CirA (COG1629), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: MSDD01000006.1 Acinetobacter baumannii strain 11606 NODE_22, whole genome shotgun sequence (198285 bp)
Overview 1 RT 1: 77629-83194 bp Neighborhood of RT #1 [77629, 83250] TetR_N RVT-Retrons PaaD PaaY Feature: gene Location: 77629-78231 bp Feature: domain Description: TetR_N Location: 77677-77800 bp Feature: domain Description: TetR_N Location: 77677-77800 bp Feature: gene Location: 79219-80445 bp Feature: gene Location: 80651-81823 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80906-81560 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80906-81560 bp Feature: gene Location: 82184-82567 bp Feature: domain Description: PaaD Location: 82226-82559 bp Feature: domain Description: PaaD Location: 82 2 2 6-82 559 bp Feature: gene Location: 82645-83250 bp Feature: domain Description: PaaY Location: 82654-83194 bp Feature: domain Description: PaaY Location: 82 654-83194 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), RVT-Retrons, PaaD (TIGR02286), PaaY (TIGR02287)