myRT

myRT report for GCA_001929775.1_ASM192977v1

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Seq: LQEU01000104.1 Mannheimia haemolytica strain 2683MH isolate swab isolate 1 contig_104, whole genome shotgun sequence (131055 bp)
Overview 1 RT 1: 47275-51673 bp Neighborhood of RT #1 [47275, 51673] rplM rpsI RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 47275-47703 bp Feature: domain Description: rplM Location: 47278-47701 bp Feature: domain Description: rplM Location: 47278-47701 bp Feature: gene Location: 47720-48115 bp Feature: domain Description: rpsI Location: 47732-48113 bp Feature: domain Description: rpsI Location: 47732-481 1 3 bp Feature: gene Location: 49797-50327 bp Feature: domain Description: RVT_N Location: 49866-50109 bp Feature: domain Description: RVT_N Location: 49866-501 09 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50154-50322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501 54-50322 bp Feature: gene Location: 50442-50906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50448-50814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50448-5081 4 bp Feature: gene Location: 50903-51517 bp Feature: domain Description: GIIM Note: maturase Location: 50915-51098 bp Feature: domain Description: GIIM Note: maturase Location: 5091 5-51 098 bp Feature: domain Description: HNHc Note: nucleases Location: 51326-51482 bp Feature: domain Description: HNHc Note: nucleases Location: 51 326-51 482 bp Feature: gene Location: 51539-51673 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: LQEU01000083.1 Mannheimia haemolytica strain 2683MH isolate swab isolate 1 contig_83, whole genome shotgun sequence (37654 bp)
Overview 1 RT 1: 15536-27339 bp Neighborhood of RT #1 [15536, 27344] rpoB PRK00566 RVT-UG2 PRK00062 Feature: gene Location: 15536-19561 bp Feature: domain Description: rpoB Location: 15560-19550 bp Feature: domain Description: rpoB Location: 15560-19550 bp Feature: gene Location: 19824-24107 bp Feature: domain Description: PRK00566 Location: 19860-23949 bp Feature: domain Description: PRK00566 Location: 19860-2 3949 bp Feature: gene Location: 24502-25812 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 24697-25516 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 4697-2 5516 bp Feature: gene Location: 25815-25997 bp Feature: gene Location: 26064-27344 bp Feature: domain Description: PRK00062 Location: 26070-27339 bp Feature: domain Description: PRK00062 Location: 2 6070-2 7339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase)