myRT

myRT report for GCA_001929885.1_ASM192988v1

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Seq: LQEV01000087.1 Mannheimia haemolytica strain 2700MH isolate swab isolate 1 contig_87, whole genome shotgun sequence (56493 bp)
Overview 1 RT 1: 47577-51975 bp Neighborhood of RT #1 [47577, 51975] rplM rpsI RVT_N RVT-GII RVT-GII GIIM HNHc Feature: gene Location: 47577-48005 bp Feature: domain Description: rplM Location: 47580-48003 bp Feature: domain Description: rplM Location: 47580-48003 bp Feature: gene Location: 48022-48417 bp Feature: domain Description: rpsI Location: 48034-48415 bp Feature: domain Description: rpsI Location: 48034-4841 5 bp Feature: gene Location: 50099-50629 bp Feature: domain Description: RVT_N Location: 50168-50411 bp Feature: domain Description: RVT_N Location: 501 68-5041 1 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50456-50624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50456-50624 bp Feature: gene Location: 50744-51208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50750-51116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50750-51 1 1 6 bp Feature: gene Location: 51205-51819 bp Feature: domain Description: GIIM Note: maturase Location: 51217-51400 bp Feature: domain Description: GIIM Note: maturase Location: 51 21 7-51 400 bp Feature: domain Description: HNHc Note: nucleases Location: 51628-51784 bp Feature: domain Description: HNHc Note: nucleases Location: 51 628-51 784 bp Feature: gene Location: 51841-51975 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rplM (PRK09216), rpsI (PRK00132), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: LQEV01000095.1 Mannheimia haemolytica strain 2700MH isolate swab isolate 1 contig_95, whole genome shotgun sequence (102005 bp)
Overview 1 RT 1: 79887-91690 bp Neighborhood of RT #1 [79887, 91695] rpoB PRK00566 RVT-UG2 PRK00062 Feature: gene Location: 79887-83912 bp Feature: domain Description: rpoB Location: 79911-83901 bp Feature: domain Description: rpoB Location: 79911-83901 bp Feature: gene Location: 84175-88458 bp Feature: domain Description: PRK00566 Location: 84211-88300 bp Feature: domain Description: PRK00566 Location: 842 11-88300 bp Feature: gene Location: 88853-90163 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 89048-89867 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 89048-89867 bp Feature: gene Location: 90166-90348 bp Feature: gene Location: 90415-91695 bp Feature: domain Description: PRK00062 Location: 90421-91690 bp Feature: domain Description: PRK00062 Location: 9042 1-91690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase)