myRT

myRT report for GCA_001930195.1_ASM193019v1

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Seq: LQDK01000208.1 Mannheimia haemolytica strain 2297MH isolate swab isolate 1 contig_208, whole genome shotgun sequence (69615 bp)
Overview 1 RT 1: 10381-22166 bp Neighborhood of RT #1 [10381, 22177] PRK00062 RVT-UG2 PRK00566 rpoB Feature: gene Location: 10381-11661 bp Feature: domain Description: PRK00062 Location: 10387-11656 bp Feature: domain Description: PRK00062 Location: 1 0387-1 1 656 bp Feature: gene Location: 11728-11910 bp Feature: gene Location: 11913-13211 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 12096-12915 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 2096-1 291 5 bp Feature: gene Location: 13606-17889 bp Feature: domain Description: PRK00566 Location: 13642-17731 bp Feature: domain Description: PRK00566 Location: 1 3642-1 7731 bp Feature: gene Location: 18152-22177 bp Feature: domain Description: rpoB Location: 18176-22166 bp Feature: domain Description: rpoB Location: 1 81 76-221 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase), RVT-UG2, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), rpoB (TIGR02013)

Seq: LQDK01000080.1 Mannheimia haemolytica strain 2297MH isolate swab isolate 1 contig_80, whole genome shotgun sequence (1832 bp)
Overview 1 RT 1: 863-1832 bp Neighborhood of RT #1 [863, 1831] RVT_N RVT-GII RVT-GII Feature: gene Location: 863-1393 bp Feature: domain Description: RVT_N Location: 932-1175 bp Feature: domain Description: RVT_N Location: 932 -1175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1220-1388 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 0-1388 bp Feature: gene Location: 1508-1831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1514-1832 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1514-1832 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII