myRT

myRT report for GCA_001930625.1_ASM193062v1

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Seq: LQFD01000113.1 Mannheimia haemolytica strain 2930MH isolate swab isolate 1 contig_113, whole genome shotgun sequence (116881 bp)
Overview 1 RT 1: 64903-69299 bp Neighborhood of RT #1 [64903, 69301] GIIM HNHc RVT-GII RVT_N RVT-GII rpsI rplM Feature: gene Location: 64903-65037 bp Feature: gene Location: 65059-65673 bp Feature: domain Description: GIIM Note: maturase Location: 65071-65254 bp Feature: domain Description: GIIM Note: maturase Location: 65071 -65254 bp Feature: domain Description: HNHc Note: nucleases Location: 65482-65638 bp Feature: domain Description: HNHc Note: nucleases Location: 65482-65638 bp Feature: gene Location: 65670-66134 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65676-66042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 65676-66042 bp Feature: gene Location: 66249-66779 bp Feature: domain Description: RVT_N Location: 66318-66561 bp Feature: domain Description: RVT_N Location: 6631 8-66561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66606-66774 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 66606-66774 bp Feature: gene Location: 68461-68856 bp Feature: domain Description: rpsI Location: 68473-68854 bp Feature: domain Description: rpsI Location: 68473-68854 bp Feature: gene Location: 68873-69301 bp Feature: domain Description: rplM Location: 68876-69299 bp Feature: domain Description: rplM Location: 68876-69299 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655), rpsI (PRK00132), rplM (PRK09216)

Seq: LQFD01000093.1 Mannheimia haemolytica strain 2930MH isolate swab isolate 1 contig_93, whole genome shotgun sequence (37654 bp)
Overview 1 RT 1: 15536-27339 bp Neighborhood of RT #1 [15536, 27344] rpoB PRK00566 RVT-UG2 PRK00062 Feature: gene Location: 15536-19561 bp Feature: domain Description: rpoB Location: 15560-19550 bp Feature: domain Description: rpoB Location: 15560-19550 bp Feature: gene Location: 19824-24107 bp Feature: domain Description: PRK00566 Location: 19860-23949 bp Feature: domain Description: PRK00566 Location: 19860-2 3949 bp Feature: gene Location: 24502-25812 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 24697-25516 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 2 4697-2 5516 bp Feature: gene Location: 25815-25997 bp Feature: gene Location: 26064-27344 bp Feature: domain Description: PRK00062 Location: 26070-27339 bp Feature: domain Description: PRK00062 Location: 2 6070-2 7339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase)