myRT

myRT report for GCA_001930685.1_ASM193068v1

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Seq: LQFG01000103.1 Mannheimia haemolytica strain 2969MH isolate swab isolate 1 contig_103, whole genome shotgun sequence (56469 bp)
Overview 1 RT 1: 4519-8915 bp Neighborhood of RT #1 [4519, 8917] GIIM HNHc RVT-GII RVT_N RVT-GII rpsI rplM Feature: gene Location: 4519-4653 bp Feature: gene Location: 4675-5289 bp Feature: domain Description: GIIM Note: maturase Location: 4687-4870 bp Feature: domain Description: GIIM Note: maturase Location: 4687-4870 bp Feature: domain Description: HNHc Note: nucleases Location: 5098-5254 bp Feature: domain Description: HNHc Note: nucleases Location: 5098-5254 bp Feature: gene Location: 5286-5750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5292-5658 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5292-5658 bp Feature: gene Location: 5865-6395 bp Feature: domain Description: RVT_N Location: 5934-6177 bp Feature: domain Description: RVT_N Location: 5934-61 77 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6222-6390 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6222-6390 bp Feature: gene Location: 8077-8472 bp Feature: domain Description: rpsI Location: 8089-8470 bp Feature: domain Description: rpsI Location: 8089-8470 bp Feature: gene Location: 8489-8917 bp Feature: domain Description: rplM Location: 8492-8915 bp Feature: domain Description: rplM Location: 8492-891 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655), rpsI (PRK00132), rplM (PRK09216)

Seq: LQFG01000109.1 Mannheimia haemolytica strain 2969MH isolate swab isolate 1 contig_109, whole genome shotgun sequence (95946 bp)
Overview 1 RT 1: 73830-85633 bp Neighborhood of RT #1 [73830, 85638] rpoB PRK00566 RVT-UG2 PRK00062 Feature: gene Location: 73830-77855 bp Feature: domain Description: rpoB Location: 73854-77844 bp Feature: domain Description: rpoB Location: 73854-77844 bp Feature: gene Location: 78118-82401 bp Feature: domain Description: PRK00566 Location: 78154-82243 bp Feature: domain Description: PRK00566 Location: 78154-82 2 43 bp Feature: gene Location: 82796-84106 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 82991-83810 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 82 991-83810 bp Feature: gene Location: 84109-84291 bp Feature: gene Location: 84358-85638 bp Feature: domain Description: PRK00062 Location: 84364-85633 bp Feature: domain Description: PRK00062 Location: 84364-85633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-UG2, PRK00062 (glutamate-1-semialdehyde 2,1-aminomutase)