myRT

myRT report for GCA_001930775.1_ASM193077v1

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Seq: LQFM01000027.1 Histophilus somni strain 3171HS isolate swab isolate 1 contig_27, whole genome shotgun sequence (111082 bp)
Overview 1 RT 1: 10168-17374 bp Neighborhood of RT #1 [10168, 17376] gapA RVT_N RVT-GII GIIM HNHc nrdG PRK09263 Feature: gene Location: 10168-11172 bp Feature: domain Description: gapA Location: 10171-11155 bp Feature: domain Description: gapA Location: 1 01 71 -1 1 1 55 bp Feature: gene Location: 12387-12644 bp Feature: gene Location: 12767-14494 bp Feature: RT Description: RVT_N Location: 12842-13085 bp Feature: RT Description: RVT_N Location: 1 2842-1 3085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13130-13790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 31 30-1 3790 bp Feature: domain Description: GIIM Note: maturase Location: 13844-14075 bp Feature: domain Description: GIIM Note: maturase Location: 1 3844-1 4075 bp Feature: domain Description: HNHc Note: nucleases Location: 14300-14459 bp Feature: domain Description: HNHc Note: nucleases Location: 1 4300-1 4459 bp Feature: gene Location: 14767-15234 bp Feature: domain Description: nrdG Location: 14770-15229 bp Feature: domain Description: nrdG Location: 1 4770-1 5229 bp Feature: gene Location: 15250-17376 bp Feature: domain Description: PRK09263 Location: 15265-17374 bp Feature: domain Description: PRK09263 Location: 1 5265-1 7374 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gapA (PRK15425), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), nrdG (PRK11121), PRK09263 (anaerobic ribonucleoside triphosphate reductase; Provisional)